DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and M01G12.14

DIOPT Version :9

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001364602.1 Gene:M01G12.14 / 173093 WormBaseID:WBGene00010825 Length:340 Species:Caenorhabditis elegans


Alignment Length:343 Identity:69/343 - (20%)
Similarity:131/343 - (38%) Gaps:102/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 INASREFVDDASCASYLAGQPWPPLPFDLNGGIEDVIRKPVEN--GKRDLEIMLTYIKQ----HQ 97
            :|.::::::|            |.|||.    ..||..|..:|  |::.:|.:|:|:.|    ::
 Worm    28 LNENKKYLED------------PTLPFP----YVDVQLKVPDNGGGEKHMESVLSYLNQMGWPNK 76

  Fly    98 KELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNR--SFRVKATLLNGNVYMCKEE-----T 155
            |:               .||||.|..:..|....:.::  :.|:.....:|.:::.|..     |
 Worm    77 KK---------------PDFVTNRHTITTIATTGFSSKEQAQRLLIFRYSGVIFLLKSSEFDDLT 126

  Fly   156 PEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGKPVTNVPVNEAEEFMGVYRTNLAGILMLYG 220
            |:              :.::..|||.:......:.....:..|.:|.....:.|.|.....:||.
 Worm   127 PD--------------ILNYAIKFEHFFKKTSDEEPVGGDGTVRKAVFKATIPRGNEHPYSVLYS 177

  Fly   221 AELDCVDSKEPVDFKDCRVLDSLKFVELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYV 285
            .|:|.:..:|           |.:.||||..|..::.::.:    |:|...:.|:|...:.||.:
 Worm   178 GEMDAIYDEE-----------SREHVELKVFVNGLDNYKWK----FRSCWMYWQAFFSNVPTLVI 227

  Fly   286 GLRDTK-----------------GMLQRIDEIDVATLARN-----------KPWSASAMAWYLEQ 322
            |.|..|                 ..|:| |.|.....|::           |.||.:|...:|..
 Worm   228 GSRTGKEYQSISKHIPGFSLYKVEKLER-DSIPSTAAAKHAQRMGDRPFPPKIWSVAAGERHLRV 291

  Fly   323 FLRNLKKLLVNINDPFAV 340
            ||:.:|:..::..|.|.:
 Worm   292 FLQLVKETAISDGDCFVL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:285815 18/88 (20%)
M01G12.14NP_001364602.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12395
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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