DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and Y47H10A.5

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_493056.1 Gene:Y47H10A.5 / 173091 WormBaseID:WBGene00012961 Length:331 Species:Caenorhabditis elegans


Alignment Length:322 Identity:61/322 - (18%)
Similarity:100/322 - (31%) Gaps:121/322 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 PVENGKRDLEIMLTYIKQHQKELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKAT 142
            |::|.::...:.:..:...:.||:.:|..|               .:.|..|||.:...|.....
 Worm    38 PMQNKEKFPNMNIEVLDSGKGELMMESLLD---------------YISQTSCLQDEQPGFVTNKQ 87

  Fly   143 LL----------------NGNVYMCKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGK 191
            ||                ||..|:.|....|...:|            :|..||.:.|.      
 Worm    88 LLVALTRTGSLAIHLFRWNGTTYLLKFNEDESVNQN------------FGAAFEHHCTK------ 134

  Fly   192 PVTNVPVNEAEEF------------MGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLDSLK 244
              |:.|:||.|..            .||:.       :||..::|.||::          ::.:.
 Worm   135 --TDDPINENEPVRKAVMIAEIPRGKGVHS-------VLYSGQIDAVDNE----------VNRMH 180

  Fly   245 FVELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEIDVATLARNK 309
            : |||.....:..|    |...||..::.|:.......|.:|.|..|              ..|.
 Worm   181 Y-ELKVLSGGLTEH----FWKTKSCMFYWQAVFGKADVLIIGSRTGK--------------CPND 226

  Fly   310 PWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKH-----ASYEVLRGPEHQILPNW 366
            |.:.....|                 .||:|.||..|.::     |:.|.|:.......|.|
 Worm   227 PKTTWPKEW-----------------PPFSVYQVETLEQNQIPESAAEECLKKVLMDPAPEW 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550 15/71 (21%)
Y47H10A.5NP_493056.1 None

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