Protein Alignment Rai1 and dom-3

DIOPT Version :10

• Sequence 1: NP_996492.1
• Gene: Rai1 / 2768882
• FlyBaseID: FBgn0030793
• Length: 375
• Species: Drosophila melanogaster
• Sequence 2: NP_491496.1
• Gene: dom-3 / 172124
• WormBaseID: WBGene00001050
• Length: 393
• Species: Caenorhabditis elegans
• Alignment Length: 320
• Identity: 80/320 - (25%)
• Similarity: 134/320 - (41%)
• Gaps: 39/320 - (12%)

  Fly    61 PP--LPFDLNGGIEDVIRKPVENGKRDLEIMLTYIKQHQKELLRQSSSDARNLRLDSDFVTLRGI 123
            ||  |..||..|.|....|   .|...:.::|.:|.|...|     ....:.:..::|.|..||:
 Worm    91 PPNNLSLDLGKGFETFDPK---EGDEKIIMLLEWINQMAPE-----GGRLKKVIHEADVVCWRGL 147

  Fly   124 LRQIMCLQYD-NRSFRVKATLLNGNVYMCKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQ 187
            :.:|....|: ...:|:.|....|.:::|:|:|.:.:..:.|.:...:.|..||.|||||:|...
 Worm   148 ITKICSTIYNKEEGWRIDAIKRKGVIFLCEEKTEQAKNRDLNQTDLDKRMSYWGHKFEQYVTLDD 212

  Fly   188 AQGKPVTNVPVNEAEEFMGVYRTNL----------AGILMLYGAELDCVDSKEPVDFKDCRVLDS 242
            ...:|.|:.||...||:..|:|.:|          ..|.:.|..|:||:|...
 Worm   213 DAEQPDTSSPVTTKEEYAVVFRNDLQTDQRLNPEKRSIGIFYSGEVDCLDRHG------------ 265

  Fly   243 LKFVELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEIDVATLAR 307
             ..:||||....:.....:..||||   ||.||.||.:..:.||||..:|.::.:..:....:.:
 Worm   266 -NMLELKTQKGELGHGFYKYSKSFK---WWLQSSLVNVDHIIVGLRTQEGHVKSLTSLRTREIPQ 326

  Fly   308 NKPWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKHASYEVLRGP--EHQILPN 365
            ...|:..|...:|......:...|....|...:...:.:..|...::.|.|  |...:||
 Worm   327 RASWNFRAGFEFLSTIFTYILNCLEKDGDACVIEYRSEMGIHKGIQMRRVPVDEFDFVPN 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rai1	NP_996492.1	RAI1	224..296	CDD:462550	22/71 (31%)
dom-3	NP_491496.1	RAI1	251..315	CDD:462550	24/79 (30%)