DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlkB and Alkbh1

DIOPT Version :9

Sequence 1:NP_001334682.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001382540.1 Gene:Alkbh1 / 362766 RGDID:1308327 Length:389 Species:Rattus norvegicus


Alignment Length:359 Identity:119/359 - (33%)
Similarity:180/359 - (50%) Gaps:63/359 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKLVFKQYK-CKSTSPDLTEVVKIDDCVVKGNDQEKSDNNIVQRLSISNVESLQT-MPGVKSPKD 64
            |:.:|:.|: .:.::.||..|:...:..|..:.:......:...|::|:|....| ..|::....
  Rat    23 FRKLFRFYRQSRRSTADLGAVIDFSEAHVAQSPKPGVPKVVRFPLNVSSVTEHDTSRAGLQPVSK 87

  Fly    65 WRTYTLTNHPGIIVIRNPFSERGRRYWSARCLRDFPRTPNIVNLNERLFDESVRSDWWKQLNLCS 129
            |:.|.|..:||.|.|.|||....:.:|..:||:.:.:.||:.||::.:..|..:..|       .
  Rat    88 WQAYGLEGYPGFIFIPNPFLPGCQWHWIKQCLKLYSQKPNVCNLDKHMTKEETQGLW-------E 145

  Fly   130 DGVEFQRIK-----------SAMRWTTFGYHHNWDTKIYDEEMQSPFPEDLSSLCGLFAQALGYA 183
            ...||.|.|           ..:||.|.|||:|||:|.|..:..:|||.||:.|....|.|.|:.
  Rat   146 QSKEFLRSKDKTKRRPRSLLERLRWVTLGYHYNWDSKKYSADHYTPFPSDLAFLSEQVATACGFQ 210

  Fly   184 DFKPEAAIVNYYPVGSTLSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSLEEKPTAIYLQSGDV 248
            .|:.||.|:|||.:.|||..|.|.||.:.|.||.||||||:||||:||...:|.|||:::.|||:
  Rat   211 GFRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLKRDEAPTAMFMHSGDI 275

  Fly   249 MIMSGESRLCYHAVPRI------------IKTQASATL---SLI----IEDVDNADIKTRTIDKD 294
            |:|||.|||..|||||:            ::|...|.|   ||:    :||              
  Rat   276 MVMSGFSRLLNHAVPRVLPHPDGECLPHCLETPLPAVLPSGSLLEPCSVED-------------- 326

  Fly   295 LFHDVGNPQFWEPFSRYMDDSRININIRQVLNPG 328
                      |:..:.|:..:|:|:.:||||..|
  Rat   327 ----------WQVCATYLKTARVNMTVRQVLATG 350



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346296
Domainoid 1 1.000 167 1.000 Domainoid score I3769
eggNOG 1 0.900 - - E1_COG3145
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4393
Inparanoid 1 1.050 199 1.000 Inparanoid score I3721
OMA 1 1.010 - - QHG54092
OrthoDB 1 1.010 - - D1045321at2759
OrthoFinder 1 1.000 - - FOG0004904
OrthoInspector 1 1.000 - - oto95481
orthoMCL 1 0.900 - - OOG6_102830
Panther 1 1.100 - - LDO PTHR16557
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2064
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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