DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlkB and SPBC13G1.04c

DIOPT Version :9

Sequence 1:NP_001334682.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_596553.3 Gene:SPBC13G1.04c / 2539935 PomBaseID:SPBC13G1.04c Length:302 Species:Schizosaccharomyces pombe


Alignment Length:345 Identity:99/345 - (28%)
Similarity:158/345 - (45%) Gaps:78/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLVFKQYKCKS-TSPDLTEVVKIDDCVVKGNDQEKSDNNIVQRLSISNVESLQTMPGVKSPKD 64
            :|:|..|:|||:: |.||::||:               |.|..|......:..::.         
pombe    11 VFRLEEKRYKCRADTIPDMSEVL---------------DPNDPQSFGFEALVEIKP--------- 51

  Fly    65 WRTYTLTNHPGIIVIRN-PFSERGRRYWSARCLRDFPRTPNIVNLNE----RLFDESVRSDWWKQ 124
             |.::....||:::::| ..||...:...:..........|..||:.    .|.::|:   |.:.
pombe    52 -RVFSFQKAPGLLILKNYVSSELQMQLLKSIMFTQIQDPENKTNLSPFYQLPLGNDSI---WRRY 112

  Fly   125 LNLCSDGVEF-------------QRIKSAMRWTTFGYHHNWDTKIYDEEMQSP-FPEDLSSLC-G 174
            .|  .||...             :.:...:||.|.|..::|.||.|.:..:|| ||:||.... .
pombe   113 YN--GDGESIIDGLGETKPLTVDRLVHKKLRWVTLGEQYDWTTKEYPDPSKSPGFPKDLGDFVEK 175

  Fly   175 LFAQALGYADFKPEAAIVNYYPVGSTLSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSLEEKPT 239
            :..::..:..:|.||||||:|..|.|||.|.|.||.:.:.||.|.|.|...|:|||..|..|||:
pombe   176 VVKESTDFLHWKAEAAIVNFYSPGDTLSAHIDESEEDLTLPLISLSMGLDCIYLIGTESRSEKPS 240

  Fly   240 AIYLQSGDVMIMSGESRLCYHAVPRIIKTQASATLSLIIEDVDNADIKTRTIDKDLFHDVGNPQF 304
            |:.|.||||:||:|.||..:||||:||   .::|.:.::                    .|| :.
pombe   241 ALRLHSGDVVIMTGTSRKAFHAVPKII---PNSTPNYLL--------------------TGN-KA 281

  Fly   305 WEPFSRYMDDSRININIRQV 324
            |:   .::...|:|.|:|||
pombe   282 WD---GWISRKRVNFNVRQV 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkBNP_001334682.1 None
SPBC13G1.04cNP_596553.3 2OG-FeII_Oxy 65..263 CDD:304390 67/202 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 116 1.000 Domainoid score I1510
eggNOG 1 0.900 - - E1_COG3145
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I1504
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004904
OrthoInspector 1 1.000 - - oto100419
orthoMCL 1 0.900 - - OOG6_102830
Panther 1 1.100 - - LDO PTHR16557
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R47
SonicParanoid 1 1.000 - - X2064
TreeFam 1 0.960 - -
1211.850

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