DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlkB and Alkbh2

DIOPT Version :9

Sequence 1:NP_001334682.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001346869.1 Gene:Alkbh2 / 231642 MGIID:2141032 Length:239 Species:Mus musculus


Alignment Length:120 Identity:26/120 - (21%)
Similarity:49/120 - (40%) Gaps:20/120 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 LCGLFAQALGYADFKPEAAIVNYYPVGSTLSG--HTDHSEPNKSAPLFSFSFGQTAIFLIGGR-S 233
            :|.:..|...:       .:||.|..|....|  ..|..|....:|:.|.|||....|:...: |
Mouse   123 VCEVTGQTFNF-------VLVNRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFIFRHKDS 180

  Fly   234 LEEKP------TAIYLQSGDVMIMSGESRL-CYHAVP---RIIKTQASATLSLII 278
            ..::|      ..:.|..|.:::|:..:.. .||::|   |::..:.:.|...|:
Mouse   181 RGKRPRRTVEVVRLQLAHGSLLMMNPPTNTHWYHSLPIRKRVLAPRVNLTFRKIL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkBNP_001334682.1 None
Alkbh2NP_001346869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 11..32
2OG-FeII_Oxy_2 50..232 CDD:372627 25/115 (22%)
Substrate binding. /evidence=ECO:0000250 80..82
Substrate binding. /evidence=ECO:0000250 100..102
Alpha-ketoglutarate binding. /evidence=ECO:0000250 137..139 1/1 (100%)
Alpha-ketoglutarate binding. /evidence=ECO:0000250 226..232 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3145
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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