DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlkB and alkb-1

DIOPT Version :9

Sequence 1:NP_001334682.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_493969.4 Gene:alkb-1 / 190176 WormBaseID:WBGene00021783 Length:359 Species:Caenorhabditis elegans


Alignment Length:343 Identity:113/343 - (32%)
Similarity:166/343 - (48%) Gaps:64/343 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLVFKQYKCKSTSPDLTEVVKIDDCVVKGNDQEKSDNNIVQRLSISNVE------SLQTMPGV 59
            :||.|||:||.:...||:::|:.:           ||.:.:..:|..|..|      ||....|:
 Worm    64 LFKAVFKKYKKRKPPPDVSDVIDV-----------KSSSLLQSKLVFSTDEITSETTSLAERLGL 117

  Fly    60 KSPKDWRTYTLTNHPGIIVIRNPFSERGRRYWSARCLRDFPRTPNIVNLNERLFDESVRSDWWKQ 124
            .:|.:||.|...:..|:.::.:...:.....|..|..: :...|||.||.  |..:.|.:|    
 Worm   118 IAPSEWRVYWFPDRIGLYLLPSLLRKEKSTMWMKRAFK-YAEPPNITNLT--LHGKDVLTD---- 175

  Fly   125 LNLCSDGVEFQRIKSAMRWTTFGYHHNWDTKIYDEEMQSPFPEDLSSLCGLFAQALGYADFKPEA 189
            ..|.:.|         :||||.|..::|::|.|....: |.||:|..|..|.:::|...|.||:|
 Worm   176 PTLLTKG---------LRWTTLGVEYDWNSKEYPPNGR-PVPEELYQLGNLISRSLKLGDMKPDA 230

  Fly   190 AIVNYYPVGSTLSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSL-EEKPTAIYLQSGDVMIMSG 253
            .|:||||..|.||.|.|.|| ..:|||.|.|.|||||:|.|...| .|.|..|:|::||.:||.|
 Worm   231 TILNYYPPKSALSPHVDKSE-RSAAPLISMSLGQTAIYLSGTIDLSSEPPIPIWLRNGDFLIMHG 294

  Fly   254 ESRLCYHAVPRI--IKTQASATLSLIIEDVD-------NADIKTRTIDKDLFHDVGNPQFWEPFS 309
            :.||.|||:|.|  |..:.....|::.||.:       |.|:....||                 
 Worm   295 DQRLVYHAIPCIGSIPKRRGNRGSMMDEDQEHFEPPRGNDDVDQSIID----------------- 342

  Fly   310 RYMDDSRININIRQVLNP 327
             |::.||:|..|||| ||
 Worm   343 -YLNSSRVNFTIRQV-NP 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkBNP_001334682.1 None
alkb-1NP_493969.4 2OG-FeII_Oxy_2 133..316 CDD:372627 74/200 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162632
Domainoid 1 1.000 118 1.000 Domainoid score I3674
eggNOG 1 0.900 - - E1_COG3145
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4393
Inparanoid 1 1.050 151 1.000 Inparanoid score I2963
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54092
OrthoDB 1 1.010 - - D1045321at2759
OrthoFinder 1 1.000 - - FOG0004904
OrthoInspector 1 1.000 - - oto18008
orthoMCL 1 0.900 - - OOG6_102830
Panther 1 1.100 - - LDO PTHR16557
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R47
SonicParanoid 1 1.000 - - X2064
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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