DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr7 and Ntm

DIOPT Version :9

Sequence 1:NP_001096850.2 Gene:dpr7 / 2768865 FlyBaseID:FBgn0053481 Length:312 Species:Drosophila melanogaster
Sequence 2:XP_017451354.1 Gene:Ntm / 50864 RGDID:620958 Length:367 Species:Rattus norvegicus


Alignment Length:225 Identity:53/225 - (23%)
Similarity:85/225 - (37%) Gaps:58/225 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NVSAVVDEIAILRCRVKNKGNRTVSWMRKRDLHILTTNIYTYTGDQRFS-----VIHPPGSEDWD 119
            ||:....|.|.|||.:.|:..| |:|:.:..:        .|.|:.::.     |:.......:.
  Rat    44 NVTVRQGESATLRCTIDNRVTR-VAWLNRSTI--------LYAGNDKWCLDPRVVLLSNTQTQYS 99

  Fly   120 LKIDYAQPRDSGVYECQVNTE--PKIN-LAICLQVIADNDFQDLKTKKRFYDTKSARAKILG-ST 180
            ::|......|.|.|.|.|.|:  ||.: :.:.:||                     ..||:. |:
  Rat   100 IEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQV---------------------SPKIVEISS 143

  Fly   181 EIHVKRDSTIALAC-SVNIHAPSVIWYHGS-SVVDFDSLRGGISLETEKTDVGTTSRLMLTRASL 243
            :|.:...:.|:|.| :.....|:|.|.|.| ..|.|.|       |.|..::...:|        
  Rat   144 DISINEGNNISLTCIATGRPEPTVTWRHISPKAVGFVS-------EDEYLEIQGITR-------- 193

  Fly   244 RDSGNYTCVPNGAIPASV--RVHVLTGEQP 271
            ..||.|.|..:..:.|.|  ||.|.....|
  Rat   194 EQSGEYECSASNDVAAPVVRRVKVTVNYPP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr7NP_001096850.2 V-set 56..145 CDD:284989 23/92 (25%)
IG_like 58..140 CDD:214653 20/84 (24%)
IG_like 179..265 CDD:214653 24/89 (27%)
Ig 187..257 CDD:299845 18/71 (25%)
NtmXP_017451354.1 Ig 44..132 CDD:416386 23/96 (24%)
Ig strand A' 44..49 CDD:409353 2/4 (50%)
Ig strand B 51..59 CDD:409353 5/7 (71%)
CDR1 59..63 CDD:409353 1/3 (33%)
FR2 64..70 CDD:409353 3/6 (50%)
Ig strand C 64..70 CDD:409353 3/6 (50%)
CDR2 71..83 CDD:409353 2/19 (11%)
Ig strand C' 72..76 CDD:409353 0/11 (0%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 6/33 (18%)
Ig strand D 87..94 CDD:409353 1/6 (17%)
Ig strand E 97..103 CDD:409353 0/5 (0%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 1/3 (33%)
Ig strand G 123..132 CDD:409353 2/8 (25%)
FR4 125..132 CDD:409353 0/6 (0%)
Ig_3 136..205 CDD:404760 22/83 (27%)
Ig strand A' 144..148 CDD:409353 1/3 (33%)
Ig strand B 151..160 CDD:409353 3/8 (38%)
Ig strand F 197..205 CDD:409353 3/7 (43%)
Ig 223..307 CDD:416386 1/1 (100%)
putative Ig strand A 223..229 CDD:409353 1/1 (100%)
Ig strand B 239..243 CDD:409353
Ig strand C 252..256 CDD:409353
Ig strand E 278..282 CDD:409353
Ig strand F 292..297 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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