DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33225 and CLIPB4

DIOPT Version :9

Sequence 1:NP_001286682.1 Gene:CG33225 / 2768860 FlyBaseID:FBgn0053225 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_307755.1 Gene:CLIPB4 / 1269159 VectorBaseID:AGAP003250 Length:360 Species:Anopheles gambiae


Alignment Length:291 Identity:100/291 - (34%)
Similarity:149/291 - (51%) Gaps:53/291 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GARLGSSTLL--TNDCGTTRHPSRIRRVVGGNDA--DRFANPWMVMVLGE--NNVF---CSGSLI 87
            |.|....|.|  :.:||.    ....||:||...  |.|  ||..::..|  |..|   |.||:|
Mosquito    85 GVRSKGKTSLPESPNCGV----QLTDRVIGGQPTKIDEF--PWTALIEYEKPNGRFGFHCGGSVI 143

  Fly    88 TRLFVLTSASCLLSLPK-----QVILGEYDRNCTS-------ADCTSIRQVIDIDQKIIHGQFGL 140
            ...::||:|.|:.|:|:     :|.|||:|.:.|:       ||...   .:||::.|:|..:.|
Mosquito   144 NERYILTAAHCITSIPRGWKVHRVRLGEWDLSSTTDQEDDFYADAPI---DLDIEKIIVHPGYNL 205

  Fly   141 ETVKKY-DIALLRLAKKVSISDYVRPICLSVDRQVGRSVQH----FTATGWGTTEWNEPSTILQT 200
            :....: ||||:|..::::.|..:..|||.:...: |:.:|    ..|.|||.||....|.....
Mosquito   206 QDKSHHNDIALIRFNREINYSSTISAICLPLSNSL-RNRKHAGLSSYAAGWGKTETASASQKKLK 269

  Fly   201 VTLSKINRKYCKGRLRQN---IDASQLCVGGPR-KDTCSGDAGGPLSLTLKIDGDGKWNNKSRAF 261
            |.|:.::.|.|....::|   :|::|:|.||.| |||||||:||||...:    .|.|      :
Mosquito   270 VELTVVDVKDCSPAYQRNGISLDSTQMCAGGIRGKDTCSGDSGGPLMRQM----SGSW------Y 324

  Fly   262 LIGIVSYGSSSCS--GI-GVYTNVEHYMDWI 289
            |||:||:|...|.  |: ||||||..|:|||
Mosquito   325 LIGVVSFGPQKCGAPGVPGVYTNVAEYVDWI 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33225NP_001286682.1 Tryp_SPc 56..289 CDD:214473 92/263 (35%)
Tryp_SPc 57..292 CDD:238113 93/264 (35%)
CLIPB4XP_307755.1 CLIP 31..83 CDD:371857
Tryp_SPc 108..358 CDD:238113 93/264 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.