DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33226 and Gzma

DIOPT Version :9

Sequence 1:NP_995917.3 Gene:CG33226 / 2768859 FlyBaseID:FBgn0069056 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_703198.1 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:258 Identity:73/258 - (28%)
Similarity:117/258 - (45%) Gaps:39/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PVGVREQILGGHNADIKLHPWMVQILQRGYHFCGGSLISSLFVLTAAHCHSRYRLKVRFGRYSGI 104
            |.|..|:|:||........|:||.:..:....|.|:||:..:|||||||....:.:|..|.:| |
  Rat    22 PEGGCERIIGGDTVVPHSRPYMVLLKLKPDSICAGALIAKNWVLTAAHCIPGKKSEVILGAHS-I 85

  Fly   105 TPRYLCSSQYCSPFGPE---IDVKRIFLHSSY-RDYHNYDIALFLLAKPVRYNVQTRPICVLQTS 165
            ...            ||   :.||:.:.:..: :..|..|:.|..|.|....|   :.:.:|...
  Rat    86 KKE------------PEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLN---KNVAILHLP 135

  Fly   166 NK-DKLRQFLNYVAMFNVTGWGKTESQL-TSTILQTTSLFHLDRKFCAQ----IFDRKIGWPHIC 224
            .| |.::.    ....:|.|||:..::. .|..|:..::..:|||.|..    .|:..||...||
  Rat   136 KKGDDVKP----GTRCHVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMIC 196

  Fly   225 AGHSQ--SSTCTGDSGGPLSAELTFSGVKRTVLFGIIS-YGAPNCREV-TVFTNVLRYSNWIR 283
            ||:.:  ..:|.|||||||..|..|.|:   ..||:.. .|.|....: |:.::  ::.:|||
  Rat   197 AGNLRGGKDSCYGDSGGPLLCEGIFRGI---TAFGLEGRCGDPKGPGIYTLLSD--KHLDWIR 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33226NP_995917.3 Tryp_SPc 47..285 CDD:238113 70/251 (28%)
Tryp_SPc 47..282 CDD:214473 67/248 (27%)
GzmaNP_703198.1 Tryp_SPc 28..253 CDD:214473 67/249 (27%)
Tryp_SPc 29..256 CDD:238113 70/251 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.