DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and Hmcn2

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_006498564.1 Gene:Hmcn2 / 665700 MGIID:2677838 Length:5092 Species:Mus musculus


Alignment Length:312 Identity:68/312 - (21%)
Similarity:104/312 - (33%) Gaps:104/312 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQTGFLHCRVERLGDKDVSWIRKRDLHILTAGGTTYTSDQRFQVLRPDGSANWTLQIKYPQPRDS 132
            |....|.|....:....::|  .::.:.||..|       .:.|     |.|.||.|..|.|:|:
Mouse   987 GVPASLPCIASGVPTPKITW--TKETNALTTSG-------HYSV-----SRNGTLVIVQPSPQDA 1037

  Fly   133 GVYEC---------------QINTEP--KMSLSYTFNVVELKAEIFGPSDLMVKTGSDINLTCKI 180
            |.|.|               .:||:|  ||:.|...:|         |..:.||.|.::.|.|:.
Mouse  1038 GAYVCTATNSVGFSSQEMWLSVNTKPMIKMNGSQAVDV---------PLRVTVKAGEEVTLDCEA 1093

  Fly   181 MQGPHELGNIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAMPGDTGNYTCVP 245
            ...|..|  :.|.|.:..|              :.|.:.:....:..|::.:|..||.|.|.|..
Mouse  1094 QGSPTPL--LTWTKDANPL--------------LPVTNRYELLPSGSLRLAQAQVGDNGLYGCTA 1142

  Fly   246 T--VAKTSSVYV----------------HVIIGEH---PAAMQHNSSSNSNSFYCGICCMLLSIV 289
            :  ...||..||                .|:.||.   ....:.|.....|.|..|:..|     
Mouse  1143 SNPAGATSRRYVLRVQVPPQVQPGPRVLKVLAGEALDLNCVAEGNPQPQLNWFKDGMALM----- 1202

  Fly   290 SCCLQHFYETGCGYLHAAAALAKSAGLGPPKRATLTTSETGISAAEVAAAAG 341
                   .|...|.:|.||               :.||:.|:...|.:.:||
Mouse  1203 -------GEGAQGSVHFAA---------------VKTSDAGLYRCEASNSAG 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 25/102 (25%)
IG_like 60..150 CDD:214653 25/98 (26%)
IG_like 163..257 CDD:214653 23/111 (21%)
Ig 174..244 CDD:143165 14/69 (20%)
Hmcn2XP_006498564.1 vWFA 38..196 CDD:238119
Ig 445..511 CDD:319273
IG 525..605 CDD:214652
I-set 609..693 CDD:369462
IG 707..783 CDD:214652
IG_like 793..876 CDD:214653
I-set 889..969 CDD:369462
Ig 992..1058 CDD:386229 18/79 (23%)
IG 1076..1157 CDD:214652 23/96 (24%)
Ig 1161..1242 CDD:386229 19/99 (19%)
Ig 1262..1336 CDD:386229
I-set 1345..1429 CDD:369462
I-set 1449..1523 CDD:369462
IG 1553..1633 CDD:214652
IGc2 1654..1716 CDD:197706
Ig 1741..1819 CDD:386229
Ig 1839..1903 CDD:386229
I-set 1907..1986 CDD:369462
Ig_3 1998..2073 CDD:372822
Ig 2092..2179 CDD:386229
Ig 2183..2273 CDD:386229
Ig 2291..2367 CDD:386229
IGc2 2389..2451 CDD:197706
I-set 2476..2554 CDD:369462
I-set 2558..2650 CDD:369462
I-set 2668..2740 CDD:369462
Ig 2782..2859 CDD:386229
I-set 2876..2954 CDD:369462
I-set 2966..3046 CDD:369462
I-set 3050..3141 CDD:369462
Ig 3145..3233 CDD:386229
Ig 3256..3320 CDD:319273
Ig 3347..3422 CDD:386229
IG_like 3436..3511 CDD:214653
IGc2 3530..3592 CDD:197706
Ig 3614..3695 CDD:386229
I-set 3699..3786 CDD:369462
Ig 3789..3874 CDD:386229
Ig 3900..3967 CDD:319273
I-set 3974..4060 CDD:369462
Ig 4064..4151 CDD:386229
I-set 4155..4240 CDD:369462
IGc2 4259..4321 CDD:197706
I-set 4335..4421 CDD:369462
G2F 4423..4605 CDD:369383
FXa_inhibition 4664..4699 CDD:373209
EGF_CA 4701..4744 CDD:311536
EGF_CA 4746..4783 CDD:214542
EGF_CA 4789..4829 CDD:214542
EGF_CA 4896..4935 CDD:214542
EGF_CA 4936..4974 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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