DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr1 and sdk1a

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:339 Identity:78/339 - (23%)
Similarity:119/339 - (35%) Gaps:70/339 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TTISPSNLLPYFDFDVPRNLTVTVGQTGFLHCRVERLGDKDVSWIRKRDLHILTAGGTTYTSDQR 108
            |:::|:...|      |.::|||.|......|||.......:.|  :||..||.:|....   .|
Zfish   506 TSMAPAFTAP------PLDITVTDGAVAAFTCRVSGAPKPAIVW--RRDTQILASGSVQI---PR 559

  Fly   109 FQVLRPDGSANWTLQIKYPQPRDSGVYEC-QINTEPKMSLSYTFNVVELKAEIFGPSDLMVKTGS 172
            |.:|...|     |||:....:|:|.|.| ..|:|..::.|.:..|....:....|:|..|..|:
Zfish   560 FTLLESGG-----LQIQPVVLQDTGNYTCYAANSEGAINASASLTVWSRTSISSPPTDRRVIKGT 619

  Fly   173 DINLTCKIMQGPHELGNIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAMPGD 237
            ...|.|.....|.......|.|..|::.......|......:.:...|:              ||
Zfish   620 TAILECGATHDPRVGVRYVWKKDEELVSHSRGGRISLQEGSLHISQTWS--------------GD 670

  Fly   238 TGNYTC-VPTVAKTSSVYVHVIIGEHPAAMQH-NSSSNSNSFYCGICCMLLSIVSCCLQHFYETG 300
            .||||| |.:.|...|....:.:.|.|.:.:: .:|.|:|.         ...|.......::..
Zfish   671 IGNYTCDVISEAGNESKEARLEVIELPHSPRNLQASLNAND---------SRSVDLSWMRPFDGN 726

  Fly   301 CGYLHAAAALAKSAGLGPPKRATLT---TSETGISAAEVAAAAGASAAVASALATCN-------- 354
            ...||....|:::   ..|.|..|:   .|.||      |...|.:.|.:.....|.        
Zfish   727 SPLLHYVVELSEN---NSPWRVYLSDVDPSGTG------AMVKGLTPARSYQFRVCAVNQVGRGQ 782

  Fly   355 --------MLRERP 360
                    ||||.|
Zfish   783 YSTETNRLMLREEP 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 28/95 (29%)
IG_like 60..150 CDD:214653 28/90 (31%)
IG_like 163..257 CDD:214653 22/94 (23%)
Ig 174..244 CDD:143165 15/70 (21%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653
Ig 236..287 CDD:299845
Ig_3 322..394 CDD:290638
I-set 323..412 CDD:254352
I-set 416..505 CDD:254352
Ig 436..500 CDD:299845
I-set 510..600 CDD:254352 30/105 (29%)
Ig 527..600 CDD:299845 23/82 (28%)
I-set 605..693 CDD:254352 22/101 (22%)
Ig 610..693 CDD:299845 22/96 (23%)
FN3 697..788 CDD:238020 18/108 (17%)
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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