DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and lrit1a

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:348 Identity:65/348 - (18%)
Similarity:115/348 - (33%) Gaps:95/348 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VGQTGFLHCRVERLGDKDVSWIRKRDLHILTAGGTTYTSDQRFQVLRPDGSANWT-LQIKYPQPR 130
            ||....|.|....:...:::| |:.|...|  .||....:.:..::       |: |.:.....|
Zfish   265 VGNNVLLRCGTVGVPIPELAW-RRADGKPL--NGTVLLENSKEGIV-------WSILSVPAVSYR 319

  Fly   131 DSGVYECQ---------------INTEPKMSLSYTFNVVELKAEIFGPSDLMVKTGSDINLTCKI 180
            |:|.|.|:               ||..|||.........:||::  .|:.::.....:.::...:
Zfish   320 DTGKYICKATNYAGSAEAVISLII
NDAPKMENPTLDPKPKLKSK--KPNTMVKAAYQEKHIATYV 382

  Fly   181 MQGPHE----LGNIFW---YKGSEMLDGKGENEIDSSMARIRVEDDWTDGL-----------TSR 227
            ...|..    .|.:.:   |.|.|     .:|..:|   |:..:....||.           ||.
Zfish   383 SPTPKNGLPLSGTVSYTGPYPGME-----SDNAANS---RMNTQTASPDGFLETNLSNLAANTSS 439

  Fly   228 L-----KIKRAMP--GDTGNYTCV----PTVAKTSSVYV-HVIIGEHPAAMQHNSSSNSNSFYCG 280
            |     ::.|::.  |||....|:    ||...|::..| :.:.||......:.|..|:.....|
Zfish   440 LQQDPDRVVRSVKVIGDTDYTVCLNWRAPTAKNTTAFSVLYAVFGERDMRRINVSPGNNRIVIEG 504

  Fly   281 ICCMLLSIVSCCLQHFYETGCGYLHAAAALAKSAGLGPPKRATLTTSETGISAAE---------V 336
            :......|...|::                    ||.|.|...:..|....::|.         |
Zfish   505 LVPKTKYIACVCVK--------------------GLIPKKEQCVIFSTDAAASANGTQKLINVVV 549

  Fly   337 AAAAGASAAVASALATCNMLRER 359
            ...|...|...:.:..|..|:.:
Zfish   550 ITVACVIAVPLTVIVCCGALKRK 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 22/102 (22%)
IG_like 60..150 CDD:214653 22/98 (22%)
IG_like 163..257 CDD:214653 23/123 (19%)
Ig 174..244 CDD:143165 17/94 (18%)
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378
LRR_8 63..119 CDD:290566
LRR_RI <77..175 CDD:238064
leucine-rich repeat 85..108 CDD:275378
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378
leucine-rich repeat 157..170 CDD:275378
LRRCT 199..243 CDD:214507
I-set 252..343 CDD:254352 17/87 (20%)
Ig 259..333 CDD:299845 17/77 (22%)
fn3 448..515 CDD:278470 15/66 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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