DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and Ntm

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_017451354.1 Gene:Ntm / 50864 RGDID:620958 Length:367 Species:Rattus norvegicus


Alignment Length:308 Identity:65/308 - (21%)
Similarity:103/308 - (33%) Gaps:102/308 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGWLL---LLSMVLLRGYNAALAPTPPTTSTTTISPSNLLPYFDFDVPRNLTVTVGQTGFLHCRV 77
            |.|.:   |.::.|.:|.        |..|.....|..:         .|:||..|::..|.|.:
  Rat    12 ISWAIFTGLAALCLFQGV--------PVRSGDATFPKAM---------DNVTVRQGESATLRCTI 59

  Fly    78 ERLGDKDVSWIRKRDLHILTAGGTTYTSDQRFQVLRPDGSANWTLQIKYPQPRDSGVYECQINTE 142
            :....: |:|:.:..  ||.||...:..|.|. ||..:....::::|:.....|.|.|.|.:.|:
  Rat    60 DNRVTR-VAWLNRST--ILYAGNDKWCLDPRV-VLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTD 120

  Fly   143 PKMSLSYTFNVVELKAEIFG-PSDLMVKTGSDINLTCKIMQGPHELGNIFWYKGSEMLDG----- 201
            .....|....:|::..:|.. .||:.:..|::|:||| |..|..| ..:.|...|....|     
  Rat   121 NHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTC-IATGRPE-PTVTWRHISPKAVGFVSED 183

  Fly   202 ------------KGENEIDSS-------MARIRV------------------------------- 216
                        .||.|..:|       :.|::|                               
  Rat   184 EYLEIQGITREQSGEYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAV 248

  Fly   217 ---EDDW-------TDG----------LTSRLKIKRAMPGDTGNYTCV 244
               |..|       .:|          ..|||........|.||||||
  Rat   249 PSAEFQWFKDDKRLVEGKKGVKVENRPFLSRLTFFNVSEHDYGNYTCV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 23/94 (24%)
IG_like 60..150 CDD:214653 23/89 (26%)
IG_like 163..257 CDD:214653 32/157 (20%)
Ig 174..244 CDD:143165 27/144 (19%)
NtmXP_017451354.1 Ig 44..132 CDD:416386 23/91 (25%)
Ig strand A' 44..49 CDD:409353 3/4 (75%)
Ig strand B 51..59 CDD:409353 2/7 (29%)
CDR1 59..63 CDD:409353 0/3 (0%)
FR2 64..70 CDD:409353 2/6 (33%)
Ig strand C 64..70 CDD:409353 2/6 (33%)
CDR2 71..83 CDD:409353 4/13 (31%)
Ig strand C' 72..76 CDD:409353 1/5 (20%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 9/34 (26%)
Ig strand D 87..94 CDD:409353 3/7 (43%)
Ig strand E 97..103 CDD:409353 0/5 (0%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 1/3 (33%)
Ig strand G 123..132 CDD:409353 1/8 (13%)
FR4 125..132 CDD:409353 1/6 (17%)
Ig_3 136..205 CDD:404760 17/70 (24%)
Ig strand A' 144..148 CDD:409353 1/3 (33%)
Ig strand B 151..160 CDD:409353 5/9 (56%)
Ig strand F 197..205 CDD:409353 3/7 (43%)
Ig 223..307 CDD:416386 13/74 (18%)
putative Ig strand A 223..229 CDD:409353 0/5 (0%)
Ig strand B 239..243 CDD:409353 0/3 (0%)
Ig strand C 252..256 CDD:409353 1/3 (33%)
Ig strand E 278..282 CDD:409353 3/3 (100%)
Ig strand F 292..297 CDD:409353 5/5 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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