DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and dscamb

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:327 Identity:66/327 - (20%)
Similarity:106/327 - (32%) Gaps:125/327 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 PRNLTVTVGQTGFLHCRVERLGDKDVSWIRKRD-----LHILTAG---------------GTTY- 103
            ||.:..:||....|.|.|....:.|::|.|..:     :::...|               |..| 
Zfish   320 PRKVRGSVGSQVSLFCSVTGSDEFDITWYRNAEKIYQGINVRITGINNENLVMEGMAKSDGGAYQ 384

  Fly   104 --------TSDQRFQVLRPDG-------------------------------SANWT-------- 121
                    ::....||:..||                               :..||        
Zfish   385 CFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSPNEPISLVCHVKGTPLPTVTWTLDDDPVIK 449

  Fly   122 -------------------LQIKYPQPRDSGVYECQINTEPKMSLSYTFNVVELKAEIFGPS--- 164
                               |.:.:.|..|.|||.|..|.... |:||     :.:..:.||:   
Zfish   450 DSNHRMDRIITTEGHVLSYLNVSHTQVSDGGVYRCTCNNSAG-SVSY-----QARINVRGPASIR 508

  Fly   165 ---DLMVKTGSDINLTCKIMQGPHELGNIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTS 226
               ::....|.|..:.|:|:..|:.  :|.|||.|.:|.......        ..|::.|     
Zfish   509 PMKNVTAIAGRDTYIHCRIIGYPYY--SIKWYKDSNLLPFNHRQR--------AFENNGT----- 558

  Fly   227 RLKIKRAMPGDTGNYTCVPTVAKTSSVY--VHVIIGEHPAAMQHNSSSNSNSFYCG----ICCML 285
             ||:......|.|.|||...|.....::  |||.: :.|..:||   |:|.|...|    |.|::
Zfish   559 -LKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTV-KVPPLIQH---SDSQSASIGQRVFIPCVV 618

  Fly   286 LS 287
            :|
Zfish   619 IS 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 30/180 (17%)
IG_like 60..150 CDD:214653 29/176 (16%)
IG_like 163..257 CDD:214653 23/101 (23%)
Ig 174..244 CDD:143165 17/69 (25%)
dscambXP_009289749.1 I-set 132..198 CDD:254352
I-set 225..310 CDD:254352
IGc2 239..300 CDD:197706
IG_like 320..400 CDD:214653 13/79 (16%)
IGc2 328..391 CDD:197706 10/62 (16%)
IG_like 417..501 CDD:214653 13/89 (15%)
Ig 424..498 CDD:143165 13/79 (16%)
IG_like 511..592 CDD:214653 24/96 (25%)
IGc2 518..576 CDD:197706 20/73 (27%)
I-set 595..685 CDD:254352 10/29 (34%)
Ig 612..682 CDD:143165 3/9 (33%)
I-set 689..785 CDD:254352
Ig7_DSCAM 706..785 CDD:143211
IG_like 795..883 CDD:214653
Ig 803..890 CDD:299845
FN3 887..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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