DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr1 and Tyro3

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_058788.1 Gene:Tyro3 / 25232 RGDID:3923 Length:880 Species:Rattus norvegicus


Alignment Length:289 Identity:70/289 - (24%)
Similarity:107/289 - (37%) Gaps:53/289 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LSMVLLRGYNAALAPTPPTTSTTTISPSNLLPYFDFDVPRNLTVTVGQTGFLHCRVERLGDKDVS 86
            |..:||.|..:.|.|.........:.           .|..:||:.||...|:|.||.:.|.|:.
  Rat    12 LRPLLLAGLASLLLPGSAAAGLKLMG-----------APVKMTVSQGQPVKLNCSVEGMDDPDIH 65

  Fly    87 WIRKRDLHILTAGGTTYTSDQRFQVLRPDGSANW--TLQIKYPQPRDSGVYECQI--NTEPKMSL 147
            |::.        |.....:.   ||.......||  .|.:|..:..|:|:|.||:  ..|.|:|.
  Rat    66 WMKD--------GAVVQNAS---QVSISISEQNWIGLLSLKSAERSDAGLYWCQVKDGEETKISQ 119

  Fly   148 SYTFNVVELKAEIFGPSDLMVKTGSDINLTCKIMQGPHELGNIFWYKGSEMLDGKGENEIDSSMA 212
            |....|..:......|.||.|.......|:|:.: ||.|...|||::|...:.|..     ||.:
  Rat   120 SVWLTVEGVPFFTVEPKDLAVPPNVPFQLSCEAV-GPPEPVTIFWWRGPTKVGGPA-----SSPS 178

  Fly   213 RIRVEDDWTDGLTSRLKIKRAMPGDTGNYTCVPTVAKTSSVYVHVIIGEHPAAMQHN------SS 271
            .:.|     .|:|.|.:.........|..|..|.:.:..:          |.|...|      ||
  Rat   179 VLNV-----TGVTQRTEFSCEAHNIKGLATSRPAIIRLQA----------PPAAPFNITVTTISS 228

  Fly   272 SNSNSFYCGICCMLLSIVSCCLQHFYETG 300
            ||::..:......|..:.||.:|..:..|
  Rat   229 SNASVAWVPGADGLALLHSCTVQVAHAPG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 28/98 (29%)
IG_like 60..150 CDD:214653 28/93 (30%)
IG_like 163..257 CDD:214653 23/93 (25%)
Ig 174..244 CDD:143165 18/69 (26%)
Tyro3NP_058788.1 IG_like 39..125 CDD:214653 28/96 (29%)
IGc2 46..111 CDD:197706 21/75 (28%)
Ig2_Tyro3_like 131..209 CDD:143226 23/88 (26%)
IG_like 135..204 CDD:214653 21/79 (27%)
FN3 215..307 CDD:238020 11/43 (26%)
fn3 315..396 CDD:278470
PTKc_Tyro3 498..781 CDD:270659
Pkinase_Tyr 508..776 CDD:285015
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..827
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 842..864
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.