DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment dpr1 and Pvr

DIOPT Version :9

Sequence 1:	NP_001286645.1	Gene:	dpr1 / 2768858	FlyBaseID:	FBgn0040726	Length:	367	Species:	Drosophila melanogaster
Sequence 2:	NP_058772.2	Gene:	Pvr / 25066	RGDID:	3813	Length:	412	Species:	Rattus norvegicus

Alignment Length:	269	Identity:	67/269 - (24%)
Similarity:	96/269 - (35%)	Gaps:	78/269 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 SRANIGLLNWLIGW--LLLLSMVLLRGYNAALAPTPPTTSTTTISPSNLLPYFDFDVPRNLTVTV 67
            ||:.:    |.:|.  |||||...|:.....:|                     ..|..|.|..:
  Rat     8 SRSRV----WSVGLLRLLLLSCFTLQKAGGEIA---------------------VQVLSNSTGFL 47

  Fly    68 GQTGFLHCRVERLGDKD------VSWIRKRD---LHILTA-----GGTTYTSDQRFQVLRP---D 115
            |.:..|||   .|..||      ::|: |||   .|...|     .|.:.:..:|.:.|..   :
  Rat    48 GGSTVLHC---SLASKDNVTITQLTWM-KRDPDGSHPSVAVFHPKKGPSISDPERVKFLVAKVYE 108

  Fly   116 GSANWTLQIKYPQPRDSGVYECQINTEPKMSLSYTFNVVELK--------AEIFGPSDLMVKTGS 172
            ...|.:|.|...:..|.|:|||||.|.|..|.|..   |.||        ||...||..::.  .
  Rat   109 DLRNASLAISNLRVEDEGIYECQIATFPTGSKSAN---VWLKVFARPKNTAEALEPSPTLMP--Q 168

  Fly   173 DINLTCKIMQGPHELGNIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAMP-- 235
            |: ..|....| |..|.|.|           .:.::.|...:: |.....|.|:.:.....:|
  Rat   169 DV-AKCISADG-HPPGRITW-----------SSNVNGSYREMK-ETGSQPGTTTVISYLSMVPSS 219

  Fly   236 -GDTGNYTC 243
             .|..|.||
  Rat   220 QADGTNITC 228

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
dpr1	NP_001286645.1	Ig	59..154	CDD:299845	33/111 (30%)
		IG_like	60..150	CDD:214653	32/106 (30%)
		IG_like	163..257	CDD:214653	18/84 (21%)
		Ig	174..244	CDD:143165	15/73 (21%)
Pvr	NP_058772.2	IG_like	41..148	CDD:214653	34/113 (30%)
		Ig1_PVR_like	49..148	CDD:143195	31/105 (30%)
		Ig	152..246	CDD:299845	20/93 (22%)
		IG_like	268..338	CDD:214653
		Ig	<269..342	CDD:299845
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910