DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and Dscam

DIOPT Version :9

Sequence 1:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_006522949.1 Gene:Dscam / 13508 MGIID:1196281 Length:2034 Species:Mus musculus


Alignment Length:231 Identity:54/231 - (23%)
Similarity:88/231 - (38%) Gaps:60/231 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PSNLLPYFDFDVPRNLTVTVGQTGFLHCRVERLGDKDVSWIRKRDL----HILTA---GGTTYTS 105
            |:::.|.      :|:|...|:..::||||.......:.|.:..:|    |...|   .||...|
Mouse   504 PASIRPM------KNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLS 562

  Fly   106 DQRFQVLRPDGSANWTLQIKYPQPRDSGVYECQINTEPKMSLSYTFNVVELKAEIFGPSDL-MVK 169
            |.:.:|                   |.|.|.|.:..:|::|.|.:.:|.........|.:. ...
Mouse   563 DVQKEV-------------------DEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFS 608

  Fly   170 TGSDINLTCKIMQGPHELGNIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAM 234
            .|..:.:.|.::.|...: .|.|.|     ||:   .|.:|:.   |..|..| .||.|:|....
Mouse   609 IGQRVFIPCVVVSGDLPI-TITWQK-----DGR---PIPASLG---VTIDNID-FTSSLRISNLS 660

  Fly   235 PGDTGNYTCVPTVAKTSSVYVHVIIGEHPAAMQHNS 270
            ....|||||   :|:..:           ||::|.|
Mouse   661 LMHNGNYTC---IARNEA-----------AAVEHQS 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr1NP_001286645.1 Ig 59..154 CDD:299845 23/101 (23%)
IG_like 60..150 CDD:214653 23/96 (24%)
IG_like 163..257 CDD:214653 24/94 (26%)
Ig 174..244 CDD:143165 20/69 (29%)
DscamXP_006522949.1 Ig 15..115 CDD:386229
IGc2 239..300 CDD:197706
IG 320..400 CDD:214652
Ig_3 410..488 CDD:372822
IGc2 518..575 CDD:197706 17/75 (23%)
Ig 596..686 CDD:386229 28/114 (25%)
Ig_DSCAM 707..784 CDD:143211
Ig 802..889 CDD:386229
FN3 885..978 CDD:238020
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig_3 1301..1363 CDD:372822
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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