DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr1 and igsf10

DIOPT Version :9

Sequence 1:	NP_001286645.1	Gene:	dpr1 / 2768858	FlyBaseID:	FBgn0040726	Length:	367	Species:	Drosophila melanogaster
Sequence 2:	XP_012819117.2	Gene:	igsf10 / 100494018	XenbaseID:	XB-GENE-6072998	Length:	2884	Species:	Xenopus tropicalis

Alignment Length:	296	Identity:	64/296 - (21%)
Similarity:	102/296 - (34%)	Gaps:	98/296 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 WLLLLSMVLLRG-----YNAA-------LAPTPPTTSTTTISPSNLLPYFD----FDV------- 59
            |||......|.|     |:|.       .:||.........:..|.:.|.:    .:|
Frog  2628 WLLPNGTRFLNGPSISKYHAGSNGTFIIYSPTKDDAGKYRCAARNKVGYIEKLIILEVGQKPNIL 2692

  Fly    60 --PRN-LTVTVGQTGFLHCRVERLGDKDVSWIRKRDLHILTAGGTTYTSDQ-----RFQVLRPDG 116
              ||. :...:|:...|||..:.:....|:|       ||.:|   |..::     |:::|.
Frog  2693 THPRGPIKSIIGEALSLHCLSDGMPRPSVTW-------ILPSG---YAIERPQVQGRYKLLE--- 2744

  Fly   117 SANWTLQIKYPQPRDSGVYECQI-NTEPKMSLSYTFNVVELKAEIFG--PSDLMVKTGSDINLTC 178
              |.||.|:.....|.|.|:|:. |...:.:::.|..||.....|..  |..:..:.||.:.|.|
Frog  2745 --NGTLVIQETALHDRGNYQCKAKNYAGETAITVTVVVVAYPPRITNKPPQTIHTRAGSAVRLNC 2807

  Fly   179 KIMQGPHELGNIFW---------------YKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRL 228
            ..:..|..  :|||               ..|:|:|..:|                       .|
Frog  2808 MAIGIPKP--DIFWELPDLSVLSTASQGSLTGTELLHPQG-----------------------TL 2847

  Fly   229 KIKRAMPGDTGNYTCVPTVAKT------SSVYVHVI 258
            .|:.....|:|.|.|   :||.      |..|::||
Frog  2848 VIQNPQSSDSGIYKC---IAKNSLGTDMSKTYLNVI 2880

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Gene	Sequence	Domain	Region	External ID	Identity
dpr1	NP_001286645.1	Ig	59..154	CDD:299845	25/110 (23%)
		IG_like	60..150	CDD:214653	23/96 (24%)
		IG_like	163..257	CDD:214653	23/114 (20%)
		Ig	174..244	CDD:143165	15/84 (18%)
igsf10	XP_012819117.2	leucine-rich repeat	40..59	CDD:275380
		leucine-rich repeat	60..83	CDD:275380
		PPP1R42	68..221	CDD:411060
		LRR_8	82..142	CDD:404697
		leucine-rich repeat	84..107	CDD:275380
		leucine-rich repeat	108..131	CDD:275380
		leucine-rich repeat	132..155	CDD:275380
		leucine-rich repeat	156..187	CDD:275380
		leucine-rich repeat	188..211	CDD:275380
		PCC	193..>277	CDD:188093
		Ig	477..552	CDD:416386
		Ig strand A'	481..484	CDD:409353
		Ig strand B	490..497	CDD:409353
		Ig strand C	503..509	CDD:409353
		Ig strand C'	511..517	CDD:409353
		Ig strand D	524..528	CDD:409353
		Ig strand E	531..536	CDD:409353
		Ig strand F	544..552	CDD:409353
		IGc2	585..649	CDD:197706
		Ig strand C	601..606	CDD:409353
		Ig strand C'	608..612	CDD:409353
		Ig strand D	617..622	CDD:409353
		Ig strand E	625..631	CDD:409353
		Ig strand F	638..646	CDD:409353
		Herpes_BLLF1	<885..1272	CDD:282904
		Ig_3	1904..1984	CDD:404760
		Ig strand C	1936..1940	CDD:409353
		Ig strand E	1963..1967	CDD:409353
		Ig strand F	1977..1982	CDD:409353
		Ig strand G	1991..1994	CDD:409353
		Ig_3	2001..2081	CDD:404760
		Ig strand A'	2011..2014	CDD:409353
		Ig strand B	2020..2027	CDD:409353
		Ig strand C	2033..2038	CDD:409353
		Ig strand C'	2040..2042	CDD:409353
		Ig strand D	2053..2057	CDD:409353
		Ig strand E	2060..2065	CDD:409353
		Ig strand F	2073..2081	CDD:409353
		Ig strand G	2084..2094	CDD:409353
		Ig_3	2098..2177	CDD:404760
		Ig strand A	2098..2101	CDD:409353
		Ig strand A'	2107..2110	CDD:409353
		Ig strand B	2117..2124	CDD:409353
		Ig strand C	2130..2136	CDD:409353
		Ig strand C'	2142..2144	CDD:409353
		Ig strand D	2150..2155	CDD:409353
		Ig strand E	2157..2161	CDD:409353
		Ig strand F	2170..2178	CDD:409353
		Ig strand G	2181..2191	CDD:409353
		Ig_3	2198..2277	CDD:404760
		Ig strand B	2214..2223	CDD:409353
		Ig strand C	2229..2238	CDD:409353
		Ig strand D	2250..2253	CDD:409353
		Ig strand E	2256..2262	CDD:409353
		Ig strand F	2269..2277	CDD:409353
		Ig_3	2293..2380	CDD:404760
		Ig strand A'	2304..2309	CDD:409353
		Ig strand C	2326..2330	CDD:409353
		Ig strand D	2355..2358	CDD:409353
		Ig strand E	2359..2364	CDD:409353
		Ig strand F	2372..2380	CDD:409353
		IGc2	2413..2477	CDD:197706
		Ig strand B	2416..2420	CDD:409353
		Ig strand C	2429..2433	CDD:409353
Ig strand E	2453..2457	CDD:409353
Ig strand F	2467..2472	CDD:409353
Ig strand B	2515..2521	CDD:409353
IG_like	2516..2587	CDD:214653
Ig strand C	2527..2532	CDD:409353
Ig strand C'	2534..2536	CDD:409353
Ig strand D	2546..2550	CDD:409353
Ig strand E	2553..2558	CDD:409353
Ig strand F	2566..2574	CDD:409353
Ig strand G	2577..2587	CDD:409353
Ig	2612..2675	CDD:409353	10/46 (22%)
Ig strand B	2612..2616	CDD:409353