DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-W68 and spo11

DIOPT Version :9

Sequence 1:NP_995901.1 Gene:mei-W68 / 2768853 FlyBaseID:FBgn0002716 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_031749912.1 Gene:spo11 / 493562 XenbaseID:XB-GENE-995590 Length:396 Species:Xenopus tropicalis


Alignment Length:345 Identity:113/345 - (32%)
Similarity:183/345 - (53%) Gaps:32/345 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IERIALELLSNLVHGNATLSVPRNSS-----------GNVISEY---RRVSYNNRGSRHSFCVLI 58
            ||||...:..:|....|.:....|.:           |..|:::   |:|..|...|...|.:::
 Frog    51 IERIIQGITESLSKNEAPVLTLDNRTNWANIEFNHLVGLQIAKHCTTRKVRSNCAKSAQKFALML 115

  Fly    59 YMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAG 123
            .:||.:::|.......|.|.:||::..|..||:.:.....|:..||:...::|.||:.|||.|||
 Frog   116 KVLSVIYKLVQTDTYTTKRDIYYNDVQLYGSQTVVDNIVSDLSCMLKIPRINLHILSTSKGCVAG 180

  Fly   124 DLRLLMTNGDVLDSSLY-GGP---LTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGTF 184
            ||.....:|    |.:| ||.   :.:|.:.|.|..:.|.|:|:||:||::.|:.||..| |...
 Frog   181 DLWFTAEDG----SKVYCGGSSSGVLVPINVEGIRHLSTQAKFILIIEKDATFQRLLDDN-FCAR 240

  Fly   185 ERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLTT 249
            ....|||||||.||..||.:..:|.:...:..:.||||||:|:|||.:|::||.|||:.:..||.
 Frog   241 SGPCILITGKGVPDLNTRLLTRKLWDSFHIPIFTLVDADPYGIEIMCIYKYGSISMSYEAHHLTV 305

  Fly   250 PALRWIGLHPSEIPAL---GTGAVALVAGDNKKINDLLARHDL--EPGVRQELRMLQDVQLKAEI 309
            ||:.|:||.||::..|   ....:.|...|.:|:..:..|..:  :|..::|:..:...:.||||
 Frog   306 PAIAWLGLLPSDLERLFIPKDVLIPLSPLDRRKLLSIQKRPYIACQPLWKREIEKMAASERKAEI 370

  Fly   310 ESVI----DFLTDDYIPNKI 325
            :::.    |||:..|:|||:
 Frog   371 QALTSLSPDFLSRVYLPNKL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-W68NP_995901.1 Spo11 3..327 CDD:224611 113/345 (33%)
TP6A_N 50..113 CDD:282286 16/62 (26%)
TOPRIM_TopoIIB_SPO 161..315 CDD:173774 58/162 (36%)
spo11XP_031749912.1 PRK04342 45..396 CDD:235287 113/345 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5161
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 156 1.000 Inparanoid score I4197
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1272299at2759
OrthoFinder 1 1.000 - - FOG0002859
OrthoInspector 1 1.000 - - oto103475
Panther 1 1.100 - - LDO PTHR10848
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1077
SonicParanoid 1 1.000 - - X2691
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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