DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-W68 and Spo11

DIOPT Version :9

Sequence 1:NP_995901.1 Gene:mei-W68 / 2768853 FlyBaseID:FBgn0002716 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_038961537.1 Gene:Spo11 / 366261 RGDID:1306454 Length:401 Species:Rattus norvegicus


Alignment Length:301 Identity:95/301 - (31%)
Similarity:158/301 - (52%) Gaps:18/301 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFSENIERIALELLSNLVHGNATLSVPRNSSG--NVISE------------YRRVSYNNRGSRHS 53
            |...:||.|..:::.:|....|......|.|.  |:..|            .|::..::..|...
  Rat    46 EVLTSIENIIQDIIKSLARNEAPAFTIDNRSSWENMTFEDAFGLQMRPQCTTRKIKSDSLRSVRK 110

  Fly    54 FCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASK 118
            |.:::.:||.:::|.......|.|.:||....|.|:|:.:.....|:..||:....||.:::.||
  Rat   111 FALILKILSMIYKLIQSNTYATKRDIYYTESQLFRNQAAVDSIIDDISCMLKVPRRSLHVISTSK 175

  Fly   119 GLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
            ||:||:||.:..:|..:..........:|::.:.:..:.|.|:|:|||||::.|:.||..| |.:
  Rat   176 GLIAGNLRYVEEDGTQVQCMCSATATAVPSNIQGMQNLVTDAKFLLIVEKDATFQRLLDDN-FCS 239

  Fly   184 FERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLT 248
            .....|::||||.||..||.:|.:|.:...:..:.||||||:|:|||.:|::||.||||.:..||
  Rat   240 RMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLT 304

  Fly   249 TPALRWIGLHPSEIPALG---TGAVALVAGDNKKINDLLAR 286
            .|.:||:||.||:|..|.   ...:.|...|..|::.:|.|
  Rat   305 VPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRR 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-W68NP_995901.1 Spo11 3..327 CDD:224611 95/301 (32%)
TP6A_N 50..113 CDD:282286 17/62 (27%)
TOPRIM_TopoIIB_SPO 161..315 CDD:173774 55/129 (43%)
Spo11XP_038961537.1 SPO11_like 2..44 CDD:367549
Spo11 43..360 CDD:224611 95/301 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350758
Domainoid 1 1.000 125 1.000 Domainoid score I5367
eggNOG 1 0.900 - - E1_COG1697
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6059
Inparanoid 1 1.050 151 1.000 Inparanoid score I4287
OMA 1 1.010 - - QHG56846
OrthoDB 1 1.010 - - D1272299at2759
OrthoFinder 1 1.000 - - FOG0002859
OrthoInspector 1 1.000 - - oto96770
orthoMCL 1 0.900 - - OOG6_101269
Panther 1 1.100 - - LDO PTHR10848
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2691
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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