DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-W68 and Spo11

DIOPT Version :9

Sequence 1:NP_995901.1 Gene:mei-W68 / 2768853 FlyBaseID:FBgn0002716 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_006499680.1 Gene:Spo11 / 26972 MGIID:1349669 Length:466 Species:Mus musculus


Alignment Length:415 Identity:112/415 - (26%)
Similarity:192/415 - (46%) Gaps:102/415 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IERIALELLSNLVHGNATLSVP------RNSSGNVISE------------YRRVSYNNRGSRHSF 54
            ||.|..:::.:|    |...||      |:|..|::.:            .|::..::..|...|
Mouse    51 IENIIQDIIKSL----ARNEVPAFTIDNRSSWENIMFDDSVGLRMIPQCTTRKIRSDSPKSVKKF 111

  Fly    55 CVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKG 119
            .:::.:||.:::|.......|.|.:||.:..|..:|:.:..|..|:..||:....||.:|:.|||
Mouse   112 ALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVPRRSLHVLSTSKG 176

  Fly   120 LVAGDLRLLMTNGDVLDSSLYGGPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGTF 184
            |:||:||.:..:|..:..:.......:||:.:.:..:.|.|:|:|||||::.|:.||..| |.:.
Mouse   177 LIAGNLRYMEEDGTRVQCTCSATATAVPTNIQGMQHLITDAKFLLIVEKDATFQRLLDDN-FCSR 240

  Fly   185 ERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGS------------ 237
            ....|::||||.||..||.:|.:|.:...:..:.||||||:|:|||.:|::||            
Mouse   241 MSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEIMCIYKYGSMVSTEKRVCSPV 305

  Fly   238 ----------------------------------------------------------KSMSFSS 244
                                                                      :||||.:
Mouse   306 STHTVHSLGGLLTGLVRQGFPECPREMVISSRASLCLSGVSPALSISSNLTDEMRCVQESMSFEA 370

  Fly   245 QGLTTPALRWIGLHPSEIPALG---TGAVALVAGDNKKINDLLARHDL--EPGVRQELRMLQDVQ 304
            ..||.|.:||:||.||:|..|.   ...:.|...|..|::.:|.|..:  :|..::||.|:.|.:
Mouse   371 HNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSK 435

  Fly   305 LKAEIESVI----DFLTDDYIPNKI 325
            :||||:::.    |:|:..|:|||:
Mouse   436 MKAEIQALTLLSSDYLSRVYLPNKL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-W68NP_995901.1 Spo11 3..327 CDD:224611 112/415 (27%)
TP6A_N 50..113 CDD:282286 17/62 (27%)
TOPRIM_TopoIIB_SPO 161..315 CDD:173774 64/232 (28%)
Spo11XP_006499680.1 SPO11_like 2..44 CDD:367549
PRK04342 42..466 CDD:235287 112/415 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847246
Domainoid 1 1.000 149 1.000 Domainoid score I4415
eggNOG 1 0.900 - - E1_COG1697
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6059
Inparanoid 1 1.050 174 1.000 Inparanoid score I4067
Isobase 1 0.950 - 0 Normalized mean entropy S3450
OMA 1 1.010 - - QHG56846
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002859
OrthoInspector 1 1.000 - - oto93223
orthoMCL 1 0.900 - - OOG6_101269
Panther 1 1.100 - - LDO PTHR10848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1077
SonicParanoid 1 1.000 - - X2691
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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