DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-W68 and rec12

DIOPT Version :9

Sequence 1:NP_995901.1 Gene:mei-W68 / 2768853 FlyBaseID:FBgn0002716 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_593479.1 Gene:rec12 / 2542150 PomBaseID:SPAC17A5.11 Length:345 Species:Schizosaccharomyces pombe


Alignment Length:351 Identity:92/351 - (26%)
Similarity:158/351 - (45%) Gaps:50/351 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SENIERIALELLSNLVHGNA-TLSVPRNSSGNVISEYRRVSYNN-RGSRHS-------------- 53
            |.:.:::....:...||... .||.|...|.||..:.|:  :|: .||..|              
pombe     3 SNDKKKVVRSWIEQFVHDFVEQLSKPTKDSVNVALKRRK--HNSWNGSLDSKANERQKVKVFSFP 65

  Fly    54 -----FCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGI 113
                 ...|..:|..||...:.....|.|.:||.:..|.:.|:.:.|...|:...:..|...|.:
pombe    66 RNETTIAQLFRVLDCVHEAVISDTVITKRDIYYRDVDLFKRQTVVDELLGDISNTIGCSRSDLNV 130

  Fly   114 LAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSR 178
            .|::||||.|.:.:.:.||.|:.::   .||.:  ...:|..|.:.|::||::|||:||::|...
pombe   131 EASAKGLVFGSIHIALENGTVITAT---KPLLI--SHHRISSITSTAKWVLVIEKEAVFQTLTEE 190

  Fly   179 NVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYI-LVDADPFGVEIMLVYRHGSKSMSF 242
            .:..|     |::|.||:||..||:.:.:|.:....|.:. :.|.||.|:.|...:::||.:.|.
pombe   191 ALADT-----IIVTAKGFPDLMTRKFLVKLAKALPDAKFFGIFDWDPHGLCIYSCFKYGSNAYSH 250

  Fly   243 SSQG------LTTPALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDL--EPGVRQELRM 299
            ....      |..|....|.....|.      ::.|...|.|.|..||.....  ||.||::|:.
pombe   251 EPHSQLRNLQLLGPLYEDIFNKNQEF------SLKLNKRDIKMITTLLQFEGFQKEPVVREQLQR 309

  Fly   300 LQDVQLKAEIESVIDFLTDDYIPNKI 325
            :..:|.||||:::::|  ..:|..|:
pombe   310 MLFIQKKAEIQAILEF--PSWIKGKL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-W68NP_995901.1 Spo11 3..327 CDD:224611 92/351 (26%)
TP6A_N 50..113 CDD:282286 16/81 (20%)
TOPRIM_TopoIIB_SPO 161..315 CDD:173774 47/162 (29%)
rec12NP_593479.1 Spo11 1..343 CDD:224611 92/351 (26%)
TP6A_N 69..130 CDD:282286 14/60 (23%)
TOPRIM_TopoIIB_SPO 173..328 CDD:173774 48/167 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I2433
eggNOG 1 0.900 - - E1_COG1697
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 94 1.000 Inparanoid score I1718
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002859
OrthoInspector 1 1.000 - - oto101104
orthoMCL 1 0.900 - - OOG6_101269
Panther 1 1.100 - - LDO PTHR10848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1077
SonicParanoid 1 1.000 - - X2691
TreeFam 1 0.960 - -
1211.850

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