DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-W68 and spo-11

DIOPT Version :9

Sequence 1:NP_995901.1 Gene:mei-W68 / 2768853 FlyBaseID:FBgn0002716 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_502081.1 Gene:spo-11 / 191771 WormBaseID:WBGene00004985 Length:425 Species:Caenorhabditis elegans


Alignment Length:281 Identity:84/281 - (29%)
Similarity:139/281 - (49%) Gaps:23/281 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SRHSFCVL------------IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCR 102
            |:..||:.            ::.|.:|:.|.......|.|.|||::..:..:|..:..:...:|.
 Worm    76 SKSHFCLRYTAKRKGKLDRDLHCLHQVYDLLENDKRSTKRELYYEHKAVYGNQKYLDSSIKSICE 140

  Fly   103 MLRTSPLSLGILAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDPEKIDRIETLAEFVLIVE 167
            :|..|..:|.||:..:|::.|.:..|:.|..|:|:.:..   .|.||......|.:.|:|:|:||
 Worm   141 LLNESRANLNILSCGRGIIRGAITFLVENVGVIDARVQE---VLITDALLFSNIISEADFILVVE 202

  Fly   168 KESVFESLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLV 232
            |::.|:.|:..|....|.|. ||.|.|||||..||.::..|:|:.:...|.|.||||.|:||.|.
 Worm   203 KDTTFQKLMDENFQAMFPRG-ILATSKGYPDIATRNVLKMLSEKRKFPIYGLFDADPHGIEIYLT 266

  Fly   233 YRHGSKSMSFSSQGLTTPALRWIGLHPSEIPAL---GTGAVALVAGDNKKINDLLARHDLEPG-- 292
            |::|........:|...|.:.||||.|::....   .:..:.||..|..||..::.| .::.|  
 Worm   267 YKYGPTKEFAEGRGAFVPTIEWIGLFPTDFHRFTIDQSQCLPLVRTDFVKIEKMIPR-SIQLGEI 330

  Fly   293 -VRQELRMLQDVQLKAEIESV 312
             |.:||..:...:.|.|:||:
 Worm   331 VVTRELDWMIQNKFKMELESI 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-W68NP_995901.1 Spo11 3..327 CDD:224611 84/281 (30%)
TP6A_N 50..113 CDD:282286 16/74 (22%)
TOPRIM_TopoIIB_SPO 161..315 CDD:173774 55/158 (35%)
spo-11NP_502081.1 TP6A_N 91..151 CDD:282286 13/59 (22%)
TOPRIM_TopoIIB_SPO 196..358 CDD:173774 55/158 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164756
Domainoid 1 1.000 105 1.000 Domainoid score I4191
eggNOG 1 0.900 - - E1_COG1697
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I3272
Isobase 1 0.950 - 0 Normalized mean entropy S3450
OMA 1 1.010 - - QHG56846
OrthoDB 1 1.010 - - D1272299at2759
OrthoFinder 1 1.000 - - FOG0002859
OrthoInspector 1 1.000 - - oto17790
orthoMCL 1 0.900 - - OOG6_101269
Panther 1 1.100 - - LDO PTHR10848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1077
SonicParanoid 1 1.000 - - X2691
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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