DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-1 and Smokl5

DIOPT Version :10

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001417119.1 Gene:Smokl5 / 690235 RGDID:1582875 Length:502 Species:Rattus norvegicus


Alignment Length:572 Identity:173/572 - (30%)
Similarity:271/572 - (47%) Gaps:119/572 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 TEEHIGKYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQ--LNPGSLQKLFREVRIMKMLD 308
            ||....:|.::.|||.|.:|.||||.|..||..||:||:.|.:  .:|     :..||.||..:.
  Rat    20 TESFHSQYMILNTIGHGGYATVKLALHRLTGTPVAVKILIKKEHWCHP-----VTSEVDIMMSIH 79

  Fly   309 HPNIVKLFQVIETEKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIH 373
            ||||:.|||||||:|.:|||||.|.|.:::..:...|:::|.|||..|||::||..|||.:.|:|
  Rat    80 HPNIISLFQVIETKKKIYLIMELAEGKQLYHRIREAGQLQEDEARGIFRQLLSATGYCHARGIVH 144

  Fly   374 RDLKAENLLLDSELNIKIADFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 438
            ||||.:|:::|:...|||.|||.:....||.||...||:..:||||:..||.|:||:||||:|||
  Rat   145 RDLKPDNIMIDTRGRIKIIDFGLATHVRPGQKLRYHCGTYAFAAPEMLLGKLYEGPKVDVWTLGV 209

  Fly   439 ILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKW 503
            :||.:..|.||||.|.:.:||.:|:.|||.:|..||.:.:::|...|.:||..|.::..::...|
  Rat   210 VLYCMTVGRLPFDDSNIPQLRSQVVSGKYAVPPGMSGELKDMLSLLLKVNPQHRPTIPDLLTHPW 274

  Fly   504 MNMGFE-----EDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLLGR 563
            :..|.|     .:|..| :.|     ||..:.|:..:|:...:::.||.|.:|:...|.|.||.|
  Rat   275 LKTGSEGFPQPSEEWIP-LRP-----DPAVLRAMEQIGFKAQDVKDSLYQNKYNQTVACYHLLER 333

  Fly   564 KSTDPESDGSRSGSSLSLRNISGNDAGANAGSASVQSPTHRGVHRSISASSTKPSRRASSGVGPT 628
            ::                  :.|.|                        :||:|           
  Rat   334 QA------------------LQGCD------------------------NSTRP----------- 345

  Fly   629 NAAATVAAATGAVGAVNPSNNYNAAGSAADR-ASVGSNFKRQNTIDSATIKENTARLAAQNQRPA 692
                            .|.|.:.|...:.|. |:.....:|:.:........:.::.:..:|:|:
  Rat   346 ----------------GPMNPWMAPFPSLDNPATFPQELRRRGSEPRWLGSSSNSQGSTYDQKPS 394

  Fly   693 SATQKMLTTADTTLNSPAKPRTATKYDPTNG-NRTVSGTSGIIPR-----RSTTLYEKTSSTEKT 751
            ....|..:.....|..|.  .|....|.||. :|:|...|.:..|     :||.  :|:|::.:.
  Rat   395 YGLVKRASWPGGRLCRPL--LTTPAVDLTNRISRSVPCFSSVHSRGEKNIKSTE--DKSSASAEV 455

  Fly   752 NVIPAETNLFDRLRMASAVKSSRHFPRNV-----------PSRSTFHSGQTR 792
            |.:|:.          :..|..|.:.:|:           |||...|.|..|
  Rat   456 NPVPSR----------AWPKRFRGWAKNIGNGLMQLCCCFPSRKKPHLGHNR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 113/253 (45%)
UBA_MARK_Par1 525..563 CDD:270522 12/37 (32%)
MARK1-3_C 839..936 CDD:213381
Smokl5NP_001417119.1 None
Blue background indicates that the domain is not in the aligned region.

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