DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-1 and Smok3c

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001297632.1 Gene:Smok3c / 622486 MGIID:3647925 Length:504 Species:Mus musculus


Alignment Length:581 Identity:166/581 - (28%)
Similarity:261/581 - (44%) Gaps:148/581 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 KYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQK-------LFREVRIMKMLDH 309
            :|.:::|||.|..|.||||:|..||..||:|          ::||       :..||.::.|.||
Mouse    27 QYVMLETIGHGGCATVKLAQHRLTGTHVAVK----------TIQKRGYWCILIMSEVDLLMMADH 81

  Fly   310 PNIVKLFQVIETEKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHR 374
            ||::.|.|||||:|.:|||||...|..::.::...|.::|.|||..|:|::||:.|||.:.|:||
Mouse    82 PNVISLLQVIETKKKVYLIMELCEGKSLYQHIRKAGYLQEHEARALFKQLLSAMNYCHNQGIVHR 146

  Fly   375 DLKAENLLLDSELNIKIADFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 439
            |||.:|::::.:..:||.|||.|.:..||.||:.|||:.|::|||:.....||||::|||:|||:
Mouse   147 DLKPDNIMVEKDGKVKIIDFGLSTKVKPGQKLNLFCGTYPFSAPEVLLSTPYDGPKIDVWTLGVV 211

  Fly   440 LYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWM 504
            ||.:|:|.:|||..:::.|.:|:|.|||.||..:|.:..:||...:..||..|.::..:|...|:
Mouse   212 LYFMVTGKIPFDACSIKRLVKRILAGKYSIPSRLSAELRDLLSLLMTANPKLRPTVAEVMVHPWV 276

  Fly   505 NMGF--------EEDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLL 561
            ..|.        |:..|||         ||..::|:..:|:...:||.||.|.:::...|:|.||
Mouse   277 TEGSGVFPDPCEEQTPLKP---------DPAIVKAMGHIGFQAQDIEDSLRQRKFNQTMASYCLL 332

  Fly   562 GRKSTDPESDGSRSGSSLSLRNISGNDAGANAGSASVQSPTHRGVHRSISASSTKPSRRASSGVG 626
             :|....|.|                                            :|:|     ..
Mouse   333 -KKQILKECD--------------------------------------------RPTR-----AR 347

  Fly   627 PTNAAAT-----VAAATGAVGAVNPSNNYNAAGSAADRASVGSNFKRQNTIDSATIKENTARLAA 686
            |.|.:.|     |..||..:|.....|......|:|:|        :.:....:|.|:...|::.
Mouse   348 PVNPSVTPFPSLVDTATTCLGLRRRENEPTCPWSSANR--------QVSVCGKSTSKKRDRRVSW 404

  Fly   687 QN--QRPASATQKMLTTADTTLNSPAKPRTATKYDPTNGNRTVSGTSGIIPRRSTTLYEKTSSTE 749
            .:  .||......|..|...|.:.|..........|.:...:..|            :.:.|:.:
Mouse   405 PSVLGRPRHTAPTMDHTRTRTRSVPCICSMFCTVQPNSSEESTQG------------HTRASAAD 457

  Fly   750 KTNVIPAETNLFDRLRMASAVKSSRHFPRN------------------VPSRSTFHSGQTR 792
            |    |..               ||.:||.                  :||:.|.|.||.|
Mouse   458 K----PVR---------------SRGWPRGIKGWTRMIGNAMRKLCCCIPSKETSHLGQNR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 106/258 (41%)
S_TKc 253..504 CDD:214567 106/257 (41%)
UBA_MARK_Par1 525..563 CDD:270522 13/37 (35%)
MARK1-3_C 839..936 CDD:213381
Smok3cNP_001297632.1 STKc_AMPK-like 27..275 CDD:270905 106/257 (41%)
UBA_MARK_Par1 295..334 CDD:270522 14/48 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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