DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-1 and Smok3b

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001034978.1 Gene:Smok3b / 622474 MGIID:3615348 Length:504 Species:Mus musculus


Alignment Length:593 Identity:170/593 - (28%)
Similarity:272/593 - (45%) Gaps:138/593 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 QMRSSAPMRWRATEEHI-GKYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQKL 297
            ::||.:|:   |..:.: .:|.:::|||.|..|.||||:|..||..||:|.|.|.:.   ...::
Mouse    11 KLRSKSPL---ADMDGLHAQYVMLETIGHGGCATVKLAQHRLTGTHVAVKTIRKREY---WCNRV 69

  Fly   298 FREVRIMKMLDHPNIVKLFQVIETEKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSA 362
            ..||.::.|.|||||:.|.|||||:|.:|||||...|..::.::...|.::|.|||..|:|::||
Mouse    70 ISEVELLMMADHPNIISLLQVIETKKKVYLIMELCKGKSLYQHIRKAGYLQEHEARALFKQLLSA 134

  Fly   363 VQYCHQKRIIHRDLKAENLLLDSELNIKIADFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYD 427
            :.|||.:.|:|||||.:|::::.:..:||.|||...:..||.||:.|||:.|::|||:.....||
Mouse   135 MNYCHNQGIVHRDLKPDNIMVEKDGKVKIIDFGLGTKVKPGQKLNLFCGTYPFSAPEVLLSTPYD 199

  Fly   428 GPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKR 492
            ||::|||:|||:||.:|:|.:|||..::::|.:|:|.|||.||..:|.:.::||...:..||..|
Mouse   200 GPKIDVWTLGVVLYFMVTGKIPFDACSIKKLVKRILAGKYSIPSRLSAELQDLLSLLMTANPKLR 264

  Fly   493 ASLETIMGDKWMNMGF--------EEDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQV 549
            .::..:|...|:..|.        |:..|||         ||..::|:..:|:...:||.||.|.
Mouse   265 PTVAEVMVHPWVTEGSGVFPDPCEEQTPLKP---------DPAIVKAMGHIGFQAQDIEDSLRQR 320

  Fly   550 RYDDVFATYLLLGRKSTDPESDGSRSGSSLSLRNISGNDAGANAGSASVQSPTHRGVHRSISASS 614
            :::...|:|.|| :|....|.|                                           
Mouse   321 KFNQTMASYCLL-KKQILKECD------------------------------------------- 341

  Fly   615 TKPSRRASSGVGPTNAAAT-----VAAATGAVGAVNPSNNYNAAGSAADRASVGSNFKRQNTIDS 674
             :|:|     ..|.|.:.|     |..||..:|.....|......|:|:|        :.:....
Mouse   342 -RPTR-----ARPVNPSVTPFPSLVDTATTRLGLRRRENEPTCPWSSANR--------QVSVCGK 392

  Fly   675 ATIKENTARLAAQN--QRPASATQKMLTTADTTLNSPAKPRTATKYDPTNGNRTVSGTSGIIPRR 737
            :|.|:...|::..:  .||......|..|...|.:.|..........|.:...:..|        
Mouse   393 STSKKRDRRVSWPSVLGRPRHTAPTMDHTRTRTRSVPCICSMFCTVQPNSSEESTQG-------- 449

  Fly   738 STTLYEKTSSTEKTNVIPAETNLFDRLRMASAVKSSRHFPRN------------------VPSRS 784
                :.:.|:.:|    |..               ||.:||.                  :||:.
Mouse   450 ----HTRASAADK----PVH---------------SRGWPRGIKGWTRMIGNAMRKLCCCIPSKE 491

  Fly   785 TFHSGQTR 792
            |.|.||.|
Mouse   492 TSHLGQNR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 106/251 (42%)
S_TKc 253..504 CDD:214567 106/250 (42%)
UBA_MARK_Par1 525..563 CDD:270522 13/37 (35%)
MARK1-3_C 839..936 CDD:213381
Smok3bNP_001034978.1 STKc_AMPK-like 27..275 CDD:270905 106/250 (42%)
UBA_MARK_Par1 295..334 CDD:270522 14/48 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..421 6/31 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..468 7/57 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24346
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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