DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment par-1 and mark4b

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_005157655.1 Gene:mark4b / 571279 ZFINID:ZDB-GENE-100330-2 Length:796 Species:Danio rerio


Alignment Length:836 Identity:369/836 - (44%)
Similarity:484/836 - (57%) Gaps:140/836 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 SGVAPTVNKNVLSTHSAHPSAIKQRTSSAKGSPNMQMRSSAPMRWRATEE-HIGKYKLIKTIGKG 262
            :.:.|..::|  :.|.|..||.:....|...|.::..|....:...:.|: |||.|:|:||||||
Zfish     5 AALQPGNDRN--ADHHATLSASRSEKGSGWSSRSLGARCRNSIASCSDEQPHIGNYRLLKTIGKG 67

  Fly   263 NFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYL 327
            ||||||||:|:.||:||||||||||||||.|||||||||||||.|:|||||:||:||||||||||
Zfish    68 NFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVQLFEVIETEKTLYL 132

  Fly   328 IMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHRDLKAENLLLDSELNIKIA 392
            :||||||||||||||.||||||||||.|||||||||.|||.|.|:||||||||||||::.|||||
Zfish   133 VMEYASGGEVFDYLVSHGRMKEKEARGKFRQIVSAVHYCHLKNIVHRDLKAENLLLDADSNIKIA 197

  Fly   393 DFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRE 457
            |||||||||.||||||||||||||||||||||||||||||:|||||||||||||||||||..|:|
Zfish   198 DFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGQNLKE 262

  Fly   458 LRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWMNMGFEEDELKPYIEPKAD 522
            |||||||||||:|||||||||.:||:||||||.||.:||.||.|||||:|:|.|||||||||..|
Zfish   263 LRERVLRGKYRVPFYMSTDCEGILRRFLVLNPTKRCTLEQIMKDKWMNVGYENDELKPYIEPVED 327

  Fly   523 LADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLLGRKSTDPESDGSRSGSSLSLRNI--- 584
            ..|..|::.:|.|||:|.||:.:|:..:|:::||||||||||:.|...  |||.|||||..:   
Zfish   328 YNDTSRVDVMVGMGYSRDEIKDALTTQKYNEIFATYLLLGRKNEDGME--SRSSSSLSLARVRPS 390

  Fly   585 ---SGNDA-GANAGSASVQSPTHRGVHRSISASSTKPSRRASSGVGPTNAAATVAAATGAVGAVN 645
               :|... .:.:.|:|..:.:|....|  |||:....||.|...||            :|...:
Zfish   391 AITNGTSKHSSTSSSSSTSASSHTKPQR--SASTYHRQRRHSDFCGP------------SVPVAH 441

  Fly   646 PSNNYNAAGSAADRASVGSNFKRQNTIDSATIKENTARLAAQNQRPASATQKMLTTADTTLNSPA 710
            |..:         ..|.|....::..:.|.  |.:::.:.:::..|:|   .|::||    |:|.
Zfish   442 PKRS---------PTSTGEGDLKEERLPSR--KTSSSVVGSRSIPPSS---PMVSTA----NNPN 488

  Fly   711 KPRTATKYDPTNGNRTVSGTSGIIP-----RRSTTLYEKTSSTEKTNVI--------------PA 756
            |.....:      .:.::.|:..||     ||:|.:....:.|::.:::              ||
Zfish   489 KSEIPDR------RKDINATTNNIPASAMTRRNTYVCTDRTGTDRHSLLQNGKENSSLSHRLPPA 547

  Fly   757 --ETNLFDRLRMASAVKSSR-HFPRNVPSRSTFHSGQTRARN------NTALEYSGTSGASGDSS 812
              .|:.......:|:..|.| ...|....|||||.||.|...      .|:...|..:.....|.
Zfish   548 SPSTHSISGAGASSSTSSERSRLTRGSTIRSTFHGGQLREHRPPTHAPPTSPTLSHEASPLPHSR 612

  Fly   813 HPGRMSFFSKLSSRFSKRPTI---------------------------------AD--------- 835
            .....:.|:||:|:.::|..:                                 ||         
Zfish   613 SRATTNLFTKLTSKLTRRVNLDPSKRQSSNKSVSGCTLPQGSKTVRSQTNLRESADLRSQATDTA 677

  Fly   836 ----------------EAAKPRVLRFTWSMKTTSPLMPDQIMQKIREVLDQNNCDYEQRERFVLW 884
                            :|.:||..|..|.::..||..|.:::..:||......|...|...|:|.
Zfish   678 TKSQAKKHSRYLSGYQKATEPRTPRCGWDVRVRSPRDPAEVVLALREAAQGCGCQVHQAGPFLLS 742

  Fly   885 CVHGDPNTDSLVQWEIEVCKLPR--LSLNGVRFKRISGTSIGFKNIASRIAFDLKL 938
            |.||  ...|.|.:|.|||:||.  ...:||||||:.|..:.|::||::::.:|:|
Zfish   743 CTHG--AAGSRVAFEAEVCQLPNGPTESSGVRFKRLWGAPLAFRDIAAKVSKELEL 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 215/251 (86%)
S_TKc 253..504 CDD:214567 215/250 (86%)
UBA_MARK_Par1 525..563 CDD:270522 18/37 (49%)
MARK1-3_C 839..936 CDD:213381 34/98 (35%)
mark4bXP_005157655.1 STKc_MARK 57..309 CDD:270974 215/251 (86%)
S_TKc 58..309 CDD:214567 215/250 (86%)
UBA_like_SF 327..369 CDD:304366 20/41 (49%)
MARK4_C 699..796 CDD:213382 34/98 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 459 1.000 Domainoid score I467
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 743 1.000 Inparanoid score I569
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000311
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101232
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5061
SonicParanoid 1 1.000 - - X401
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.890

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