DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-1 and Tssk1b

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001011900.1 Gene:Tssk1b / 288358 RGDID:1307352 Length:365 Species:Rattus norvegicus


Alignment Length:385 Identity:123/385 - (31%)
Similarity:196/385 - (50%) Gaps:76/385 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 IGKGNFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQK-LFREVRIMKMLDHPNIVKLFQVIET- 321
            :|:|::||||.|........||:||||:.:.....|:| |.||:.|:.||:|.:|||.:::.|| 
  Rat    18 LGEGSYAKVKSAYSERLKFNVAVKIIDRKKAPTDFLEKFLPREIEILAMLNHRSIVKTYEIFETS 82

  Fly   322 EKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHRDLKAENLLLDSE 386
            :..:|::||....|::.:::...|.::|.:||.||.|:.||::|||...::|||||.||||||.:
  Rat    83 DGKVYIVMELGVQGDLLEFIKTRGALQEDDARKKFHQLSSAIKYCHDLDVVHRDLKCENLLLDKD 147

  Fly   387 LNIKIADFGFSNEF--TPGSKL---DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 446
            .|||::|||||...  ....:|   .|||||..|||||:.||..|.....|:||||||||.:|.|
  Rat   148 FNIKLSDFGFSKRCLRDDSGRLTLSKTFCGSAAYAAPEVLQGIPYQPKVYDIWSLGVILYIMVCG 212

  Fly   447 SLPFDGSTLRELRERVLRGKYRIPF----YMSTDCENLLRKFLVLNPAKRASLETIMGDKWMNMG 507
            |:|:|.|.::::..  ::.::|:.|    :::.:|::|:.:.|..:..:|..::.|:...|    
  Rat   213 SMPYDDSNIKKMLR--IQKEHRVNFPRSKHLTGECKDLIYRMLQPDVNRRLHIDEILSHCW---- 271

  Fly   508 FEEDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLLGRKSTDPESDG 572
                     ::||.        ..|.:...|: |.|:|.:              ...|..||   
  Rat   272 ---------VQPKT--------RGLSSGAINK-EGESSRA--------------AEPSWTPE--- 301

  Fly   573 SRSGSSLSLRNISGNDAGANAGSASVQSPTHRGVHRSISASSTKPSR------RASSGVG 626
                            .||:..||:...|....  |:.:.|.|||..      |.|..||
  Rat   302 ----------------PGADKKSATKLEPKEEA--RAEAQSETKPQEDNVQVARQSENVG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 98/255 (38%)
S_TKc 253..504 CDD:214567 98/255 (38%)
UBA_MARK_Par1 525..563 CDD:270522 5/37 (14%)
MARK1-3_C 839..936 CDD:213381
Tssk1bNP_001011900.1 STKc_TSSK1_2-like 10..271 CDD:271067 98/254 (39%)
S_TKc 12..272 CDD:214567 99/268 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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