DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment par-1 and Smok2b

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001161385.1 Gene:Smok2b / 236574 MGIID:3037705 Length:484 Species:Mus musculus


Alignment Length:589 Identity:166/589 - (28%)
Similarity:269/589 - (45%) Gaps:154/589 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 EEHIGKYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQ--LNPGSLQKLFREVRIMKMLDH 309
            |....:|.:::|||.|..:||.||:|..||..||:|:|.|::  .||     :..||.::.|.||
Mouse     2 ENFHAQYVMLETIGHGGCSKVMLARHRLTGSHVAVKMIRKSECWCNP-----VMSEVELLMMADH 61

  Fly   310 PNIVKLFQVIETEKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHR 374
            |||:.|.|||||:|.:|||||...|..::.::...|.::|.|||..|:|::||:.|||.:.|:||
Mouse    62 PNIISLLQVIETKKKVYLIMELCEGKSLYQHIRNAGYLQEDEARALFKQLLSAMNYCHNQGIVHR 126

  Fly   375 DLKAENLLLDSELNIKIADFGFSNEFTPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 439
            |||.:|::::.:..:||.|||...:..||.||:.|||:.|::|||:...:.||||::|||:|||:
Mouse   127 DLKPDNIMVEKDGKVKIIDFGLGTQVKPGQKLNLFCGTYPFSAPEVLLSRPYDGPKIDVWTLGVV 191

  Fly   440 LYTLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWM 504
            ||.:|:|.:|||.:::::|..::|.|||.:|..:|.:..:|:...:..||..|.::..:|...|:
Mouse   192 LYFMVTGKVPFDAASIQKLVRQILAGKYFVPSRLSVELRDLISLLMTANPKLRPTVAEVMVHPWV 256

  Fly   505 NMGF--------EEDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLL 561
            ..|.        |:..|||         :|..::|:..:|:...:||.||.|.::::..|:|.||
Mouse   257 TEGSGVFPDPCEEQMPLKP---------NPAIVKAMGYIGFQAQDIEDSLRQRKFNETMASYCLL 312

  Fly   562 GRKSTDPESDGSRSGSSLSLRNISGNDAGANAGSASVQSPTHRGVHRSISASSTKPSRRASSGVG 626
             :|....|.|                                    |.|.|....||        
Mouse   313 -KKQILKECD------------------------------------RPIRAQPMNPS-------- 332

  Fly   627 PTNAAATVAAATGAVGAVNPSNNYNAAGSAADRASVGSNFKRQNTIDSATIKENTARLAAQNQRP 691
                             |.|      ..|..|.::.....:|:.|      :..:.||:|..|. 
Mouse   333 -----------------VTP------FPSLVDTSTFHLGLRRRET------EPTSLRLSANRQM- 367

  Fly   692 ASATQKMLTTADTTLNSPAKPRTATKYDPTNGNRTVSGTSGIIPRRSTTLYEKTSSTEKTNVIPA 756
                            |.....|:.|.|......:|||.    |..:|...:.|.:  :|..:|.
Mouse   368 ----------------SVCGRSTSKKRDRRFSWPSVSGR----PLHTTHTMDHTHT--RTRSVPC 410

  Fly   757 ETNLFDRLRMASAVKS---------------SRHFPRN------------------VPSRSTFHS 788
            ..::|..::..|:..|               ||.:||.                  :||:.|.|.
Mouse   411 IYSMFCTIQPNSSDDSTEGHTSASAEDKPVRSRGWPRGIKGWTRKIGNVMRKLCCCIPSKETSHV 475

  Fly   789 GQTR 792
            |.:|
Mouse   476 GHSR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 104/253 (41%)
S_TKc 253..504 CDD:214567 104/252 (41%)
UBA_MARK_Par1 525..563 CDD:270522 12/37 (32%)
MARK1-3_C 839..936 CDD:213381
Smok2bNP_001161385.1 STKc_AMPK-like 7..255 CDD:270905 104/252 (41%)
S_TKc 8..256 CDD:214567 104/252 (41%)
UBA_MARK_Par1 275..314 CDD:270522 13/48 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..400 13/64 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..450 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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