DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment par-1 and mark4

DIOPT Version :9

Sequence 1:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_012824414.1 Gene:mark4 / 100491038 XenbaseID:XB-GENE-6042140 Length:681 Species:Xenopus tropicalis


Alignment Length:686 Identity:344/686 - (50%)
Similarity:424/686 - (61%) Gaps:117/686 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SAIKQRTSSAKGSPNMQMRSSAPMRW---------RAT---EEHIGKYKLIKTIGKGNFAKVKLA 270
            :|..:|.:...||...: ::|.|:.|         |::   |.|:|.|:|::|||||||||||||
 Frog     5 TAGNERINDTSGSTRSE-KASTPLSWPPRPPGARSRSSVPEEPHVGNYRLLRTIGKGNFAKVKLA 68

  Fly   271 KHLPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNIVKLFQVIETEKTLYLIMEYASGG 335
            :|:.||:||||||||||||||.|||||||||||||.|:||||||||:||||||||||||||||||
 Frog    69 RHVLTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLIMEYASGG 133

  Fly   336 EVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHRDLKAENLLLDSELNIKIADFGFSNEF 400
            |||||||.||||||||||.|||||||||.|||||.|:||||||||||||||.|||||||||||||
 Frog   134 EVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDSESNIKIADFGFSNEF 198

  Fly   401 TPGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGSTLRELRERVLRG 465
            |||.||||||||||||||||||||:|:|||||||||||||||||||||||||..|:|||||||||
 Frog   199 TPGGKLDTFCGSPPYAAPELFQGKRYNGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 263

  Fly   466 KYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWMNMGFEEDELKPYIEPKADLADPKRIE 530
            |||||||||||||.:||:||||||:||.:|:.||.|||||:||:.|:||||.||:.|.|||||||
 Frog   264 KYRIPFYMSTDCEGVLRRFLVLNPSKRCTLDQIMNDKWMNIGFDSDDLKPYKEPEEDNADPKRIE 328

  Fly   531 ALVAMGYNRSEIEASLSQVRYDDVFATYLLLGRKSTDPESDG--SRSGSSLSL--RNISGNDAGA 591
            .::.|||:|.||:.:||..:|::|.|||||||||   |||:|  |||.|:|||  ..::.:....
 Frog   329 IMLEMGYSREEIKDALSSNKYNEVMATYLLLGRK---PESEGGESRSDSTLSLSRSRVASDVTNG 390

  Fly   592 NAGSASVQSPTHRGVHRSISASSTKPSRRASSGVGPTNAAATVAAATGAVGAVNPSNNYNAAGSA 656
            ...|:||.|...||..|         .||.|...||..|               ||....:....
 Frog   391 ATKSSSVHSKNQRGYQR---------QRRHSDFCGPAPA---------------PSQAKRSPPGV 431

  Fly   657 ADRASVGSNFKRQNTIDSATIKENTARLAAQ--------NQRPASATQKMLTTADTTLNSPAK-- 711
            .|..:||.                  |||.:        ..||...:..|::.|    ::|.|  
 Frog   432 GDDGAVGE------------------RLAPRRGSGSVGGGSRPPPPSSPMVSHA----HNPNKAE 474

  Fly   712 -PRTATKYDPTNGNRTVSGTSGIIPRRSTTLYEKTSSTEKTNVI---------PAETNLFDRLRM 766
             |....:..||    |::...|::.||:|.:.....|:|:.:::         |:..........
 Frog   475 IPEPRKEAPPT----TINTPPGVMGRRNTYVCTDRHSSERHSLLHNDKENSSTPSRPPALSPSTQ 535

  Fly   767 ASAVKSSRHFPRNVPSRSTFHSGQTRARNNTALEYSGTSGASGDSSHP----------GRMSFFS 821
            :.|.:||.....||  |||||.|..|.|.       |.:......:||          ...:.||
 Frog   536 SIAERSSLSRGSNV--RSTFHGGHVRDRR-------GQNPPPSSPTHPHEGLNQSRTRATSNLFS 591

  Fly   822 KLSSRFSKRPTIADEAAKPRVLRFTWSMKTTSPLMP 857
            ||:|:.::|  :.||:.:      .|..:.|...:|
 Frog   592 KLTSKLTRR--VTDESER------VWRPEVTGSYIP 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 218/251 (87%)
S_TKc 253..504 CDD:214567 218/250 (87%)
UBA_MARK_Par1 525..563 CDD:270522 22/37 (59%)
MARK1-3_C 839..936 CDD:213381 3/19 (16%)
mark4XP_012824414.1 STKc_MARK 50..302 CDD:270974 218/251 (87%)
UBA_MARK_Par1 323..361 CDD:270522 22/37 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 458 1.000 Domainoid score I486
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000311
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X401
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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