DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33462 and sdhaf4

DIOPT Version :9

Sequence 1:NP_995844.2 Gene:CG33462 / 2768841 FlyBaseID:FBgn0053462 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001008179.1 Gene:sdhaf4 / 493541 XenbaseID:XB-GENE-1007482 Length:118 Species:Xenopus tropicalis


Alignment Length:39 Identity:10/39 - (25%)
Similarity:17/39 - (43%) Gaps:9/39 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VQGFQMLLEEDCG-----IPHNISERSV--NAKLAQNPW 49
            :.|::.|..  ||     ..|.|.:::|  |.|:....|
 Frog     1 MSGYRFLAA--CGEGRKAAEHLIYDQAVAHNLKMWSGLW 37

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33462NP_995844.2 Tryp_SPc 48..272 CDD:238113 1/2 (50%)
Tryp_SPc 48..269 CDD:214473 1/2 (50%)
sdhaf4NP_001008179.1 DUF1674 76..118 CDD:311723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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