DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33461 and scaf

DIOPT Version :10

Sequence 1:NP_995843.3 Gene:CG33461 / 2768840 FlyBaseID:FBgn0053461 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster


Alignment Length:247 Identity:67/247 - (27%)
Similarity:105/247 - (42%) Gaps:52/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ARLGRYPWMAFL--HTPTYFLCAGSLINQWFVLTSAHCIE----DDVELIA---RLGENNRDNDI 103
            |.....||.|.:  .:....:|.|::|...|||:||.|:.    .|:.:.|   .||..|.... 
  Fly   429 ANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLP- 492

  Fly   104 DCENNRCLEATQEYNVDMLFKHRLYDPKDFSNDIGMLRLERRVEYTYHIQPICIFHHRRMQLVVD 168
                   .:.|....||:   |..|||...|:|:.::|||||:|:..|||||||......    |
  Fly   493 -------FQLTGVKTVDV---HPDYDPSTNSHDLAIIRLERRLEFASHIQPICISDEDPK----D 543

  Fly   169 QITWFKATGWGLTSTDLNTKSSRVLMEL-NLYRRPRNDCARIFKQNFLSGQICAGNDDGNLCRGD 232
            ....| .:|||..:..::.:.:  ||.: :...:.|::|:..      |..:|:.....: |:.|
  Fly   544 SEQCF-TSGWGKQALSIHEEGA--LMHVTDTLPQARSECSAD------SSSVCSATKFDS-CQFD 598

  Fly   233 SGGPQGRYVLIFGMKRFVQM-GIASFTYEN-CSKVSILTDVVRYG----RWI 278
            .|.     .|..|....|:: ||  |..|| |.:    ...||:.    :||
  Fly   599 VGS-----ALACGSGSSVRLKGI--FAGENSCGE----GQTVRFAKPDIKWI 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33461NP_995843.3 Tryp_SPc 41..278 CDD:214473 65/245 (27%)
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 57/216 (26%)
Blue background indicates that the domain is not in the aligned region.

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