DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fs and Reck

DIOPT Version :9

Sequence 1:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_001261853.1 Gene:Reck / 39629 FlyBaseID:FBgn0036463 Length:1071 Species:Drosophila melanogaster


Alignment Length:998 Identity:192/998 - (19%)
Similarity:295/998 - (29%) Gaps:404/998 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 HHQHQPTS-----SQNNLTFLKS-NYKFKRRAMSMAIRALPATTTPAEARRAEPSQNTD------ 57
            ||:|.|:|     |:::...|.| :|.:.....|.||.:  :..|..|:.|: |.::.|      
  Fly    55 HHRHAPSSGSKKNSRSHSVSLDSDDYDWLDADTSEAIDS--SEVTAVESIRS-PGESYDIFTCCN 116

  Fly    58 -------QLAATMSKTSAATAT------------------------QLARATSR----------- 80
                   .....:|....||.|                        |...|.:|           
  Fly   117 QVFGSCRTACENLSLVEFATGTGGDNRDELHRYCQLHQVEFWTCVNQTFDAITRGADWSGRRCCQ 181

  Fly    81 -----ECRTILGLFIVSAWSALQELANCLRQDE-------------DRYVGHGR----------- 116
                 .||.      |.|.|....:.||.|.||             |:..|..|           
  Fly   182 FGVLPHCRN------VCATSTRSPVQNCRRSDEQTLYDCLERQEAADQCCGQARTSECLEACRAV 240

  Fly   117 -----------DVNAS------------SDASDEVSMAREQQ------QHQRQHSKH-------- 144
                       |:|.:            ::.:|...:|..:|      ...::|.:|        
  Fly   241 FEPANDNHDHVDINGACGDRNADVIQCVNNHTDMTPLANAEQYIPCCEYSSKEHCRHTCRNLLHQ 305

  Fly   145 SASSSPAKSMRCTRAKAASAS---------------TG---TAAATATLGAAAAEGATSGHQLGG 191
            :|:......:...|.:||...               ||   ....:...|.:.|:|..||.  ||
  Fly   306 NATLMERSEVIFGRLEAAGCGSPLPQLPFWQCFLTVTGKLYVPGGSGRAGGSLAQGRISGQ--GG 368

  Fly   192 QPLMALLIGLLLLNFRLAAAGTCWQ---THLGSGKCGQVFSTD--ISRS----ECCGSSQSFSYT 247
            .......:|:      .||...|.:   :|.....|.|:|:::  .:||    ||....     .
  Fly   369 SLAEPNHLGM------DAAKRQCCEQASSHKCRRLCNQIFTSNWWDARSSFENECMDQP-----G 422

  Fly   248 DREL----SSVEYFFATAIGGGVECSPCMESCKGFKCGPNKKCVKRKGRPKCV---CAPECGAAL 305
            :|||    .||:             :||...|:|...     |.....||..:   |.||..||.
  Fly   423 ERELRRCIESVD-------------APCELGCQGLSF-----CSNFNNRPTELFRSCTPEHDAAA 469

  Fly   306 RR-----------RTHQQELELEQEPELEEEQ-------QEMKP-----------PRESRSLSSE 341
            |.           |...|||.::.......::       .::||           ..:...|..|
  Fly   470 REDWQLLQQRGTVRVLGQELFIKNTSRCAPDKWRALVCALQLKPCTRVGLFNGICSEDCHELLDE 534

  Fly   342 NTNFNLGLDGGQRQRADNQRKLQPRESKHRRLLIIDSSSRSSSNLPDQPTSGRRGRVEMTGYERR 406
            ..::.|     |.||        |::...|    :.......|.||         .:.:..|.: 
  Fly   535 CLDWTL-----QHQR--------PKDICSR----LKEKDDDDSPLP---------CISLESYLK- 572

  Fly   407 RHRNNHGKHLTRSMTTGANDSFPADKTP----------AQSPAADS-ILAQSRLANLANANEPAN 460
                                  |.|.:|          ||.|...| :....|..|...:..|..
  Fly   573 ----------------------PGDASPEEFQGITSPCAQKPCNGSEVCILQRGGNQGYSCIPGC 615

  Fly   461 DINRQSSTRV---------RHQHARRIEHAPNP-------DNGLRKRQHKQQQQHQHQHQDRMNT 509
            ::.:.|...|         :....:::|....|       ..||:.|..:.|....:.|      
  Fly   616 NLGQDSKLFVPFGSYVRLGKSNLHKKLEVGQFPLAEHIVCSCGLQGRLEQCQPLPSYMH------ 674

  Fly   510 EAQSANTTVSGSGSGATNHRRISQLQHGSE--------TAASSDLANTHDLAHLGGI----YAPL 562
                |:.|:.|:.|          .:|||.        :..:.::..|.....|.|.    |..|
  Fly   675 ----AHCTLPGARS----------YRHGSSFYLECNLCSCFAGEITCTKQQCRLPGFVDSGYTSL 725

  Fly   563 P---PQHSNPVCGTDGRTYNTECQLRKR---------ACRTNNAQLEVAYRGHCK----NSC-SG 610
            |   |.|..||||::|.||.:.|..:..         ||...||         |:    ||| ||
  Fly   726 PCNCPAHYVPVCGSNGNTYPSACVAKCHLPEGDYVYGACNARNA---------CQAAPPNSCPSG 781

  Fly   611 VHCLNG----LTCVEDQYLMPHCIACRIECPWDNLDVDSSGYDERQAVCGVDGKTYRSACDINRM 671
            ..||:.    |..::...|...|:         |....:.....:..||...|:||.:||    .
  Fly   782 TQCLDSRKVCLASMQRPCLQYVCV---------NATASNCSTFHQGEVCDSQGRTYPNAC----A 833

  Fly   672 ICKIGRSIAVAYPGPCRAGRVSCADIK-CG------------PKDNCLVDLQTR----------- 712
            :.|......|||...|::.|.:.:... ||            ..:..|||...|           
  Fly   834 LLKANPQGQVAYWSACQSSRFNTSPSPVCGINGVTYKSSYAARAEYVLVDYVGRCREVGLLVSDM 898

  Fly   713 QPRCVTCRYKCPRKQQRPVHKIC 735
            ..||.|  .|||    .||.|.|
  Fly   899 GRRCRT--VKCP----APVSKHC 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsNP_652376.2 KAZAL 564..604 CDD:197624 14/48 (29%)
KAZAL_FS 654..687 CDD:238052 11/32 (34%)
KAZAL_FS 723..767 CDD:238052 6/13 (46%)
ReckNP_001261853.1 KAZAL_FS 729..>753 CDD:238052 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3649
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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