DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fs and Reck

DIOPT Version :9

Sequence 1:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster
Sequence 2:XP_006238130.1 Gene:Reck / 313488 RGDID:1308845 Length:972 Species:Rattus norvegicus


Alignment Length:215 Identity:50/215 - (23%)
Similarity:73/215 - (33%) Gaps:75/215 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 PVCGTDGRTYNTECQLRKRACRTNNAQLEVAYRGHC--KNSCSGVHCLNGLTCVEDQYLMPHCIA 631
            |||..:||||.:.|  ..|.....:.|.|.   |.|  |:.|      |...|.:.|..:|....
  Rat   641 PVCAQNGRTYPSAC--IARCVGLQDHQFEF---GPCISKDPC------NPNLCPKSQRCVPKPQV 694

  Fly   632 C----------RIECPWDNLDVDSSGYDERQAVCGVDGKTYRSACDINRMICKIGRSIAVAYPGP 686
            |          :.||....|..|.:    |..||..|...:.:.|.:.:      |..:::|.||
  Rat   695 CLTTFDKFGCSQYECVPRQLTCDQA----RDPVCDTDHVEHSNLCTLYQ------RGKSLSYRGP 749

  Fly   687 CRAGRVSCADIKCGPKDNCLVDLQTRQPRCVTCRYKCPRKQQRPVHKICGYNNQTYNSWCEMHKH 751
            |                         ||.|            |....:||:|.:||:|.|..:..
  Rat   750 C-------------------------QPFC------------RTTEPVCGHNGETYSSVCAAYSD 777

  Fly   752 SCESRYF-----IGVKSQGS 766
            .....|:     :||.|:.|
  Rat   778 RVAVDYYGRCQAVGVLSEHS 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsNP_652376.2 KAZAL 564..604 CDD:197624 12/34 (35%)
KAZAL_FS 654..687 CDD:238052 7/32 (22%)
KAZAL_FS 723..767 CDD:238052 13/49 (27%)
ReckXP_006238130.1 Amnionless <802..>867 CDD:291494
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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