DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fs and Sparcl1

DIOPT Version :9

Sequence 1:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_037078.2 Gene:Sparcl1 / 25434 RGDID:2531 Length:634 Species:Rattus norvegicus


Alignment Length:513 Identity:113/513 - (22%)
Similarity:185/513 - (36%) Gaps:133/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 PNKKCVKRKGRPKCVCAPECGAALRRRTHQQELELEQ----EPELEEEQQEMKPPRESRSLSSEN 342
            ||.|..|    |..:.:.|       ..|:|..|.::    |.:|::|:.      ....||.:.
  Rat    56 PNDKAEK----PSALNSEE-------EAHEQSTEQDKTYSFEVDLKDEED------GDGDLSVDP 103

  Fly   343 TNFNLGLDGGQRQRADNQRKLQPRESKHRRLL---IIDSSSRSSSNLPDQPTSGRRGR--VEMTG 402
            |...|.|..|   .::.|:|..|..:.....:   .:||         |||.:..:|.  .|...
  Rat   104 TERTLDLQEG---TSEPQQKRLPENAGFPATVSTPFVDS---------DQPANITKGEESQEQPV 156

  Fly   403 YERRRHRNNHGKHLTRSMTTGANDSFPA----DKTPAQSPAADSILAQSRLANLANANEP----- 458
            .:..:.::..||....|||..::...|.    :|...:.|  :.:.|.|  .|.....||     
  Rat   157 SDSHQQQDESGKQTQDSMTEESHKQDPGIPNEEKEEEEDP--EDVGAPS--DNQEEEKEPPEEQP 217

  Fly   459 ----------ANDINRQSS--TRVR---------HQHARRIEHAPNPDNGLRKRQHKQQQQHQHQ 502
                      :.||.::||  |::.         .|......:|...|.....::|....:.|.|
  Rat   218 TSKWEGNGDQSEDILQESSQPTQISKTKNDFEQGSQGQEGDSNAEGEDKAAGSKEHLPHTEWQGQ 282

  Fly   503 H--------QDRMNTEAQSANTT------VSGSGSGATNHRRISQLQHGSETAASSD-------- 545
            .        .:|.:|:.:.|.:|      |.....||:::......:||    ||.|        
  Rat   283 EGRAGLDAIGNRKDTDEEKAVSTEPTDAAVVPRNHGASDNGGGDDSKHG----ASDDYFIPSQEF 343

  Fly   546 --LANTHDLAHLGGIYAPLPPQHSNPVCGTDGRTYNTECQLRKRACRTNNAQL--EVAYRGHCKN 606
              ....|.|::........|.:..|       |:...:.|..|:|..:.||:.  |...|||..:
  Rat   344 LEAERMHSLSYYLKYGEETPDESEN-------RSEAGDNQGAKKAESSPNAEPSDEGNSRGHSAD 401

  Fly   607 SCSGVHCLNGLTCVEDQYLMPHCIACRIE-CPWDNLDVDSSGYDERQAVCGVDGKTYRSACDINR 670
            ||....|..|.||..||:..|||:....| ||...: :|.:        ||.|.:||.|:|.:..
  Rat   402 SCMNFQCKRGHTCKTDQHGKPHCVCQDPETCPPAKI-LDQA--------CGTDNQTYASSCHLFA 457

  Fly   671 MIC-----KIGRSIAVAYPGPCRAGRVSCADIKCGP-----KD---NCLVDLQTRQPR 715
            ..|     |.|..:.:.|.|.|:: ..:|.|.:...     :|   |.|:.|....|:
  Rat   458 TKCMLEGTKKGHQLQLDYFGACKS-IPACTDFEVAQFPLRMRDWLKNILMQLYEPNPK 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsNP_652376.2 KAZAL 564..604 CDD:197624 10/41 (24%)
KAZAL_FS 654..687 CDD:238052 12/37 (32%)
KAZAL_FS 723..767 CDD:238052
Sparcl1NP_037078.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..335 63/315 (20%)
MSCRAMM_ClfB <95..402 CDD:411414 66/333 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..398 10/44 (23%)
KAZAL_FS 403..482 CDD:412159 27/88 (31%)
EFh_SPARC_SPARCL1 485..625 CDD:320015 7/30 (23%)
EF-hand motif 558..590 CDD:320015
EF-hand motif 593..623 CDD:320015
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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