DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fs and Sparcl1

DIOPT Version :9

Sequence 1:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster
Sequence 2:NP_001345943.1 Gene:Sparcl1 / 13602 MGIID:108110 Length:650 Species:Mus musculus


Alignment Length:539 Identity:109/539 - (20%)
Similarity:182/539 - (33%) Gaps:131/539 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 ATAIGGGVECSPCMESCKGFKCGPNKKCVKRKGRPKCVCAPECGAALRRRTHQQELELEQ----E 319
            ||....|||.:..:|:      .|:.|..|    |..:.:.|       .||:|..|.::    |
Mouse    41 ATVPIAGVEATADIEN------HPSDKAEK----PSALNSEE-------ETHEQSTEQDKTYSFE 88

  Fly   320 PELEEEQQEMKPPRESRSLSSENTNFNLGLDGGQRQRADNQRKLQPRESKHRRLLIIDSSSRSSS 384
            .:|::|:.      ....||.:.|...|.|| .|...::.|:|..|...        |..:..|:
Mouse    89 VDLKDEED------GDGDLSVDPTEGTLTLD-LQEGTSEPQQKSLPENG--------DFPATVST 138

  Fly   385 NLPDQPTSGRRGRVEMTGYERRRHRNNHGKHLTRSMTTGANDSFPADKTPAQSPAADSILAQSRL 449
            :..| |..    |..:|..:..:.:.....|...:.::.......|:::..|.|...:...:...
Mouse   139 SYVD-PNQ----RANITKGKESQEQPVSDSHQQPNESSKQTQDLKAEESQTQDPDIPNEEEEEEE 198

  Fly   450 ANLANANEPANDINRQSSTRVRHQHARRIEHAP---------NPDNGLRKRQHKQQQQHQHQHQD 505
            .......|...||...|..  :.:....:|..|         ..|:.|.:.....|.....:||.
Mouse   199 DEEEEEEEEPEDIGAPSDN--QEEGKEPLEEQPTSKWEGNREQSDDTLEESSQPTQISKTEKHQS 261

  Fly   506 RMNTEAQSANTTVSGSGSGATNHRRI----SQLQHG-------------SETAASSD------LA 547
            ....:.|.:::...|....|.:...|    .|.|.|             .|.|.|::      :.
Mouse   262 EQGNQGQESDSEAEGEDKAAGSKEHIPHTEQQDQEGKAGLEAIGNQKDTDEKAVSTEPTDAAVVP 326

  Fly   548 NTH----------DLAHLGGIYAPLPPQ--------HS-----------NPVCG-TDGRTYNTEC 582
            .:|          |..|..|....:|.|        ||           ....| ::.|....:.
Mouse   327 RSHGGAGDNGGGDDSKHGAGDDYFIPSQEFLEAERMHSLSYYLKYGGGEETTTGESENRREAADN 391

  Fly   583 QLRKRACRTNNAQL--EVAYRGHCKNSCSGVHCLNGLTCVEDQYLMPHCIACRIE-CPWDNLDVD 644
            |..|:|..:.||:.  |...|.|...||:...|..|..|..|....|||:....| ||...: :|
Mouse   392 QEAKKAESSPNAEPSDEGNSREHSAGSCTNFQCKRGHICKTDPQGKPHCVCQDPETCPPAKI-LD 455

  Fly   645 SSGYDERQAVCGVDGKTYRSACDINRMICKI-----GRSIAVAYPGPCRAGRVSCADIKCGP--- 701
            .:        ||.|.:||.|:|.:....|::     |..:.:.|.|.|:: ..:|.|.:...   
Mouse   456 QA--------CGTDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGACKS-IPACTDFEVAQFPL 511

  Fly   702 --KD---NCLVDLQTRQPR 715
              :|   |.|:.|....|:
Mouse   512 RMRDWLKNILMQLYEPNPK 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsNP_652376.2 KAZAL 564..604 CDD:197624 12/61 (20%)
KAZAL_FS 654..687 CDD:238052 11/37 (30%)
KAZAL_FS 723..767 CDD:238052
Sparcl1NP_001345943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..352 58/339 (17%)
MDN1 <60..317 CDD:227596 51/289 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..415 9/39 (23%)
KAZAL_FS 419..498 CDD:412159 24/88 (27%)
EFh_SPARC_like 501..641 CDD:320010 7/30 (23%)
EF-hand motif 574..606 CDD:320010
EF-hand motif 609..639 CDD:320010
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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