DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or46a and Or56a

DIOPT Version :10

Sequence 1:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:364 Identity:78/364 - (21%)
Similarity:142/364 - (39%) Gaps:82/364 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IMLLLFSFEMLNNISQVREILKVFFMFATEISCMAKLLHLKLKSRKLAGLV---DAMLSPEFGVK 108
            |.||..:...:.|:....:..::..:.||:.......|.:.:.| .:|||:   |.:....|..|
  Fly   103 ISLLRVAHSDIQNLMHEADNREMELLVATQAYTRTITLLIWIPS-VIAGLMAYSDCIYRSLFLPK 166

  Fly   109 SEQEMQMLELDRVAVVRMRNSYGIMSLGAASLILIVPCFDNFGELPLAMLEVCS--IEGWICYWS 171
            |        :..|..||....:.|:      |..:.|    ||||       |.  :.|::..|.
  Fly   167 S--------VFNVPAVRRGEEHPIL------LFQLFP----FGEL-------CDNFVVGYLGPWY 206

  Fly   172 QY--------LFHSICLLPTCVLNITYDSVAYSLLCFLKVQLQMLVLRLEKLGPVIEPQDNEKIA 228
            ..        |:|:..   ||            |:.::.::||:|..|:|::.  |...:::.:.
  Fly   207 ALGLGITAIPLWHTFI---TC------------LMKYVNLKLQILNKRVEEMD--ITRLNSKLVI 254

  Fly   229 MELRECAAYYNRIVRFKDLVELFIKGPGSVQ----LMCSVL--------VLVSNLYDMSTMSI-A 280
            ..|......:.::..||:.|:..::....||    |:|..:        ||:..|:...|:.: :
  Fly   255 GRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLICVPVMADFIIFSVLICFLFFALTVGVPS 319

  Fly   281 NGDAIFMLKTCIYQLVMLWQIFIICYASNEVTVQSSRLCHSIYSSQWTGWNRANRRIVLLMMQRF 345
            ..|..||.   ||..||...::|..:.:..:......|..:.:|..|..:....:::::.||...
  Fly   320 KMDYFFMF---IYLFVMAGILWIYHWHATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHA 381

  Fly   346 NSPM----LLSTFNPTFAFSLEAFGSIVNCSYSYFALLK 380
            ..||    ||...|      |..|..|...:||||.||:
  Fly   382 QRPMKMRALLVDLN------LRTFIDIGRGAYSYFNLLR 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 68/340 (20%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 68/332 (20%)

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