DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or46a and Or42b

DIOPT Version :10

Sequence 1:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:414 Identity:83/414 - (20%)
Similarity:156/414 - (37%) Gaps:102/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YKYQVWYFQILGVW---QLPT-WAADHQRRFQSMRFGFILVILFIML--------LLFSFEMLNN 59
            |.|..|..... ||   .||. :...:..:.:|...|..|..|.:.:        :..::.||..
  Fly    43 YVYLTWTLMTF-VWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWR 106

  Fly    60 ISQVREILKVFFMFATEISCMAKLLHLKLKSRKLAGLVDAMLSPEFGVKSEQEMQMLELDRVAVV 124
            :.:.:.||.     ..::.|.|                                 |.|.:::.:|
  Fly   107 LIKAKNILD-----QLDLRCTA---------------------------------MEEREKIHLV 133

  Fly   125 RMRNSYGIM-----------SLGAASLI-------LIVPCFD-NFGELPLAMLEVCSIEGWICYW 170
            ..|:::..:           |...:|::       |..|..| :.|.|.|          |:...
  Fly   134 VARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKL----------WVAST 188

  Fly   171 SQYLFHSICLLPTCVLNITYDSVAYSLLCFLKVQLQMLVLRLEKLGPVIEPQDNEKIA-----ME 230
            .:|:..|..:|.. .|:.:|..: |:|:  |:..|.||..|:.:|      :.:|.::     .|
  Fly   189 LEYMVMSGAVLQD-QLSDSYPLI-YTLI--LRAHLDMLRERIRRL------RSDENLSEAESYEE 243

  Fly   231 LRECAAYYNRIVRFKDLVELFIKGPGSVQLMCSVLVLVSNLYDMSTMS-IANGDAIFMLKTCIYQ 294
            |.:|...:..|:|:..:::..|:|....|.:...|||...|.::...| |..|.|.||     :.
  Fly   244 LVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFM-----FV 303

  Fly   295 LVMLWQIFIICYASNEVTVQSSRLCHSIYSSQWTGWNRANRRIVLLMMQRFNSPMLLSTFNPTFA 359
            :.:|.|.|..||..|.:......|.|:|:.|.|...:|..:..:|..:|....|::... ...|.
  Fly   304 ITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIA-GGIFQ 367

  Fly   360 FSLEAFGSIVNCSYSYFALLKRVN 383
            .|:.:..|:...::|...:.|::|
  Fly   368 ISMSSNISVAKFAFSVITITKQMN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 67/335 (20%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 72/368 (20%)

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