DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or46a and Or42b

DIOPT Version :9

Sequence 1:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:414 Identity:83/414 - (20%)
Similarity:156/414 - (37%) Gaps:102/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YKYQVWYFQILGVW---QLPT-WAADHQRRFQSMRFGFILVILFIML--------LLFSFEMLNN 59
            |.|..|..... ||   .||. :...:..:.:|...|..|..|.:.:        :..::.||..
  Fly    43 YVYLTWTLMTF-VWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWR 106

  Fly    60 ISQVREILKVFFMFATEISCMAKLLHLKLKSRKLAGLVDAMLSPEFGVKSEQEMQMLELDRVAVV 124
            :.:.:.||.     ..::.|.|                                 |.|.:::.:|
  Fly   107 LIKAKNILD-----QLDLRCTA---------------------------------MEEREKIHLV 133

  Fly   125 RMRNSYGIM-----------SLGAASLI-------LIVPCFD-NFGELPLAMLEVCSIEGWICYW 170
            ..|:::..:           |...:|::       |..|..| :.|.|.|          |:...
  Fly   134 VARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKL----------WVAST 188

  Fly   171 SQYLFHSICLLPTCVLNITYDSVAYSLLCFLKVQLQMLVLRLEKLGPVIEPQDNEKIA-----ME 230
            .:|:..|..:|.. .|:.:|..: |:|:  |:..|.||..|:.:|      :.:|.::     .|
  Fly   189 LEYMVMSGAVLQD-QLSDSYPLI-YTLI--LRAHLDMLRERIRRL------RSDENLSEAESYEE 243

  Fly   231 LRECAAYYNRIVRFKDLVELFIKGPGSVQLMCSVLVLVSNLYDMSTMS-IANGDAIFMLKTCIYQ 294
            |.:|...:..|:|:..:::..|:|....|.:...|||...|.::...| |..|.|.||     :.
  Fly   244 LVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFM-----FV 303

  Fly   295 LVMLWQIFIICYASNEVTVQSSRLCHSIYSSQWTGWNRANRRIVLLMMQRFNSPMLLSTFNPTFA 359
            :.:|.|.|..||..|.:......|.|:|:.|.|...:|..:..:|..:|....|::... ...|.
  Fly   304 ITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIA-GGIFQ 367

  Fly   360 FSLEAFGSIVNCSYSYFALLKRVN 383
            .|:.:..|:...::|...:.|::|
  Fly   368 ISMSSNISVAKFAFSVITITKQMN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 67/335 (20%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 72/368 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466086
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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