DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or46a and Or42a

DIOPT Version :9

Sequence 1:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:380 Identity:78/380 - (20%)
Similarity:148/380 - (38%) Gaps:72/380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FIMLLLFSFE-------------MLNNISQVREILKVFFMFATEI-----SCMAKLL---HLKLK 89
            |:..:|:||.             :...||.:.|.....|:.:.::     ||..|:|   .|..:
  Fly    45 FVAYVLWSFALNFCSTFYQPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKR 109

  Fly    90 SRKLAGLVDAMLSPEFGVKSEQEMQMLELDRVAVVRMRNSYGIMSL--------GAASLILIVPC 146
            ..:...|:|     |...:.....:.|::.|...:..|..:..|::        ..:::.:..|.
  Fly   110 FDEANNLLD-----EMDRRITDPGERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLSAIFIGRPP 169

  Fly   147 FDNF--------GELPLAM---LEVCSIEGWICYWSQYLFHSICLLPTCVLNITYDSVAYSLLCF 200
            :.|:        ..|.||:   ||..::.|            .|....||     |....:.:..
  Fly   170 YQNYYPFLDWRSSTLHLALQAGLEYFAMAG------------ACFQDVCV-----DCYPVNFVLV 217

  Fly   201 LKVQLQMLVLRLEKLGPVIEPQDNEKIAME-LRECAAYYNRIVRFKDLVELFIKGPGSVQLMCSV 264
            |:..:.:...||.:||..  |.::::...| |.:|...:..|:||.|.:...|.|...||.:...
  Fly   218 LRAHMSIFAERLRRLGTY--PYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVG 280

  Fly   265 LVLVSNLYDMSTMSIAN-GDAIFMLKTCIYQLVMLWQIFIICYASNEVTVQSSRLCHSIYSSQWT 328
            |||...|  ::.:..|| |.||..|.   :...:|.:....|...|.:|....:|..:::.|.|.
  Fly   281 LVLGFTL--INIVLFANLGSAIAALS---FMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWI 340

  Fly   329 GWNRANRRIVLLMMQRFNSPMLLSTFNPTFAFSLEAFGSIVNCSYSYFALLKRVN 383
            ...:..::.::..:|:...|:.....| .|..|:....|:...|:|.|.|:|::|
  Fly   341 DEEKRYQKTLMYFLQKLQQPITFMAMN-VFPISVGTNISVTKFSFSVFTLVKQMN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 66/339 (19%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 65/334 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466074
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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