DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or46a and Or1a

DIOPT Version :10

Sequence 1:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:415 Identity:86/415 - (20%)
Similarity:147/415 - (35%) Gaps:109/415 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RRFQSMRFGFIL------------VILFIMLLLFSFE-------MLNNISQVREILKVFFMFATE 76
            :||...|.|..|            ::..||.|..|||       |:.|.:|:             
  Fly    15 QRFTFARMGLDLQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQI------------- 66

  Fly    77 ISCMAKLLH--------LKL-----KSRKLAGLVDAMLSP---EFGVKSEQEMQMLELDRVAVVR 125
            :.|...|:|        ||:     ||..|..|:..:.||   |..|.:|...|......:|.: 
  Fly    67 VLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGTEWRSQNQRGQLMAAI- 130

  Fly   126 MRNSYGIMSLGAASLILIVPCFDNFGELPLAMLE---------VCSIEGWICY--WSQYLFHSIC 179
                |.:|..|.:...|::|       :.|.||:         |.|....:.|  ...:::...|
  Fly   131 ----YFMMCAGTSVSFLLMP-------VALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDC 184

  Fly   180 LLPTCVLNI-----TYDSVAYSLLCFLKVQLQ--MLVLRLEKLGPVIEPQDNE----KIAME--- 230
            .|...||:.     |.....|. .|.|.|.||  .|..:|:::.....|..::    .|.:|   
  Fly   185 CLMVFVLSFFCCSTTGVDTLYG-WCALGVSLQYRRLGQQLKRIPSCFNPSRSDFGLSGIFVEHAR 248

  Fly   231 LRECAAYYNRIVRFKDLVELFIKGPGSVQLMCSVLVLVSNLYDMSTMSIANGDAIFMLKTCIYQL 295
            |.:...::|........||:.|    ...|.|||:.       ...|...|.:..|:   ..:.|
  Fly   249 LLKIVQHFNYSFMEIAFVEVVI----ICGLYCSVIC-------QYIMPHTNQNFAFL---GFFSL 299

  Fly   296 VMLWQIFIICYASNEVTVQSSRLCHSIYS-SQWTGWNRANRRIVLLMMQRFNSPMLLSTF----- 354
            |:..|:.|..:.:.:|.:::.|....:|. ..|......:|::.|..::|.....:|..:     
  Fly   300 VVTTQLCIYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELG 364

  Fly   355 NPTFAFSLEAFGS---IVNCSYSYF 376
            .|...:.....||   ::|..|:.:
  Fly   365 RPLLVWIFRTAGSFTTLMNALYAKY 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 72/360 (20%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 65/323 (20%)

Return to query results.
Submit another query.