DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk25 and scnn1b

DIOPT Version :9

Sequence 1:NP_995766.1 Gene:ppk25 / 2768722 FlyBaseID:FBgn0053349 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:577 Identity:97/577 - (16%)
Similarity:175/577 - (30%) Gaps:216/577 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LAELCQESSIHGMPYIARR-----------DLHWAERLFWTFIILGSAY--YAISSCLNQWYRFR 65
            |...|..::.||...|.:.           .|.:|..:||.:.:|...|  |.:|..|:      
 Frog    32 LVWFCDNTNTHGPKRIIKEGPKKRVMWFILTLVFAGLVFWQWGVLILTYLSYGVSVSLS------ 90

  Fly    66 DNPIVYEYEYLFGLRIFPFVGITLC---PRYHDETEIPRLINQTWGVDPSEDKEKAVYYRKFLLA 127
                       .|.:...|..:|:|   |..:...: |.|          :|.:..|     ..|
 Frog    91 -----------IGFKTMEFPAVTVCNANPYKYSRVK-PLL----------KDLDALV-----ATA 128

  Fly   128 INGLRYSTLETLEPFENDTTLDNVNYLNILLTLQKKVIAVKIPPELAPIITEV-----------G 181
            ::.:::|:.:....|...:|..||. |:..|.....::.:.......||:..:           .
 Frog   129 LDRIQFSSQDQANTFTQSSTNQNVT-LDPTLWNHIPLVVIDETDPSNPIVNNIFDNNAIYSKNNS 192

  Fly   182 LCQTSSQLNRYGNPYG---KLETQDMEPMKQCGY-----------------LSNCITSLKPINSI 226
            ...:|.....|...|.   ||.|.:   ..||.|                 ||:..::: |:...
 Frog   193 FRNSSEDQTSYSQRYKVAMKLCTNN---NTQCVYRNFTSGIQALQEWYLLQLSSIFSNV-PLADR 253

  Fly   227 VAPIFMYLHDVEEMML-------PDDMR--TPSFDAK---------------------------- 254
            :|..|    ..|:::|       |...|  |..:||.                            
 Frog   254 IAMGF----KAEDLILTCLFGGQPCSYRNFTRIYDADYGNCYIFNWGQEGEDPMASANPGADFGL 314

  Fly   255 ----DIESKDLDIMLHTTSAE--------------------------------SEVRNLPVAYRK 283
                |||..:....:.||:|.                                .::.::...|..
 Frog   315 KLVLDIEQGEYLPYVQTTAAARLILHQQRSFPFVKDLGIYAMPGTETSIAVLVDQLEHMEAPYSS 379

  Fly   284 CRFSDEN----NL--QYYSPYHPSLCRLECRIKWALSLCNCKPYFYVAAPEVPICTVSGMLCLAR 342
            |..:..:    ||  ::.|.|....|...|..:..:..|.|..|.|      |:  .:|....:.
 Frog   380 CTVNGSDIPVQNLYAEFNSSYSIQSCLRSCYQEQMVQTCGCADYQY------PL--PNGSEYCSN 436

  Fly   343 SK---WLERPCD----------------CYPSCREETF-TIFKVSD--QTGGDD-NYSGERFERT 384
            .|   |:  ||.                |...|.:..: .:..::|  ..|..| .:....:|:.
 Frog   437 DKYPDWV--PCYYGLRDSVADRESCISLCQQPCNDTQYKMVISMADWPSAGAQDWIFHVLSYEKD 499

  Fly   385 LIINLQISRMGI----------NRRVVFSTDQ-----LIMSFGGAIGLFLGASFMTI 426
            ...|:.::|.||          |.|.:..::.     |:.:.||..|.::|.|.:.|
 Frog   500 SSHNITVNRNGIVRLNIYFQEFNYRSITESEATNVVWLLSNLGGQFGFWMGGSVLCI 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk25NP_995766.1 ASC 18..432 CDD:279230 96/573 (17%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 97/577 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.