DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk25 and Scnn1a

DIOPT Version :9

Sequence 1:NP_995766.1 Gene:ppk25 / 2768722 FlyBaseID:FBgn0053349 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus


Alignment Length:629 Identity:100/629 - (15%)
Similarity:180/629 - (28%) Gaps:253/629 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SRPKQP----DWLAE-----------LCQESSIHG------MPYIARRDLHWA-------ERLFW 42
            |.|:||    :.|.|           .|..::|||      ..:...:...||       ..::|
  Rat    62 SAPRQPTEEEEALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNRMKTAFWAVLWLCTFGMMYW 126

  Fly    43 TFIILGSAYY------------------AISSCLNQWYRFRDNPIVYE-------------YEY- 75
            .|.:|...|.                  |::.|....||:.:.....|             |:| 
  Rat   127 QFALLFEEYLSYPVSLNINLNSDKLVFPAVTVCTLNPYRYTEIKEELEELDRITEQTLFDLYKYN 191

  Fly    76 ----------------LFGLRIFPFVGI-TLCPRYHDET----------EIPRLINQTW--GVDP 111
                            |.|....|...: |..|.|...|          ..|::..:.|  |...
  Rat   192 SSYTRQAGARRRSSRDLLGAFPHPLQRLRTPPPPYSGRTARSGSSSVRDNNPQVDRKDWKIGFQL 256

  Fly   112 SEDKEKAVYYRKFLLAINGLR--YSTLETLEPFENDTTLDNVNYLNILLTLQKKVIAVKIPPELA 174
            ....:...:|:.:...::.:|  |                ..:|:|||..|.          :.:
  Rat   257 CNQNKSDCFYQTYSSGVDAVREWY----------------RFHYINILSRLS----------DTS 295

  Fly   175 PIITEVGL------CQTS----SQLN-------RYGNPY--GKLETQDMEPMKQCGYLSNCITSL 220
            |.:.|..|      |:.:    :|.|       .|||.|  ......::......|..:....:|
  Rat   296 PALEEEALGNFIFTCRFNQAPCNQANYSKFHHPMYGNCYTFNDKNNSNLWMSSMPGVNNGLSLTL 360

  Fly   221 K-------PINSIVAPIFMYLHDVEEMMLPDD--------------MRTPSFDA-----KDIESK 259
            :       |:.|.|....:.:|..:|....||              ||..:.|:     .|....
  Rat   361 RTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKEALDSLGGNYGDCTEN 425

  Fly   260 DLDIMLHTTSAESEVRNLPVAYRKCRFSDENNLQYYSPYHPSLCRLECRIKWALSLCNCKPYFYV 324
            ..|:         .|:||                |.|.|...:|...|..:..:..|.|...||.
  Rat   426 GSDV---------PVKNL----------------YPSKYTQQVCIHSCFQENMIKKCGCAYIFYP 465

  Fly   325 AAPEVPIC-------------------TVSGMLCLARSKWLERPCDC-----------YPSCREE 359
            ....|..|                   ::..:.|.::.:   :||..           :||.:.:
  Rat   466 KPKGVEFCDYRKQSSWGYCYYKLQGAFSLDSLGCFSKCR---KPCSVINYKLSAGYSRWPSVKSQ 527

  Fly   360 TFTIFKVSDQTGGDDNYSGERFERTLIINLQISRMGINRRVVFSTD---------------QLIM 409
            .:....:|.|    :||:           :...|.|:.:..:|..:               .|:.
  Rat   528 DWIFEMLSLQ----NNYT-----------INNKRNGVAKLNIFFKELNYKTNSESPSVTMVSLLS 577

  Fly   410 SFGGAIGLFLGASFMTIY---GVVYFFLTFIAYTCKNRFCKRFF 450
            :.|....|:.|:|.:::.   .:::..|.........||..|::
  Rat   578 NLGSQWSLWFGSSVLSVVEMAELIFDLLVITLLMLLRRFRSRYW 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk25NP_995766.1 ASC 18..432 CDD:279230 90/582 (15%)
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 94/611 (15%)
deg-1 88..600 CDD:273309 90/580 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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