DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk25 and del-1

DIOPT Version :9

Sequence 1:NP_995766.1 Gene:ppk25 / 2768722 FlyBaseID:FBgn0053349 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001355359.1 Gene:del-1 / 181534 WormBaseID:WBGene00000952 Length:694 Species:Caenorhabditis elegans


Alignment Length:632 Identity:116/632 - (18%)
Similarity:191/632 - (30%) Gaps:241/632 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ELCQESSIHGMPYIARRDLHWAERLFWTFIILGSAYYAISSCLNQWYRFRD----NPIVYEYEYL 76
            :.|::::.||:..|....|:|. |..|..:.|    ..|..|:..:...:|    ...:...|.:
 Worm    75 DFCEQTTFHGVNMIFTTSLYWV-RFLWVVVSL----VCICLCMYSFSHVKDKYDRKEKIVNVELV 134

  Fly    77 FGLRIFPFVGITLCP----RYHDETEIPRLINQTWGVDPSEDKEKAVYY-------------RKF 124
            |  ...||..||:|.    :.|....:|. |::|     .:...:||.|             |:.
 Worm   135 F--ESAPFPAITVCNLNPFKNHLARSVPE-ISET-----LDAFHQAVVYSNDATMDELSGRGRRS 191

  Fly   125 LLAINGLRYSTLETLEPFEND-----------------TTLDN---------------------- 150
            |  .:|..:..|: .||..:|                 .||:|                      
 Worm   192 L--NDGPSFKYLQ-YEPVYSDCSCVPGRQECIAQTSAPRTLENACICNYDRHDGSAWPCYSAQTW 253

  Fly   151 ----------VNYLNILLTL--------------------QKKVIAV------KIPPELAPI--- 176
                      :.:.|:..|.                    :.:|..:      |||.:.:|:   
 Worm   254 EKSICPECNDIGFCNVPNTTGSGNIPCYCQLEMGYCVFQPESRVRRIWEFQGNKIPEKGSPLRKE 318

  Fly   177 ----ITEVGLCQTSSQL--------------------NRYGNPYGKLETQDMEPMKQCGY----- 212
                :|::|....:.|:                    .|....|||.|.     :|.|.:     
 Worm   319 YMEQLTQLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSEL-----IKMCSFNGQQC 378

  Fly   213 -------------LSNCIT-----SLKPINSIVAP-----IFMY------------------LHD 236
                         ..||.|     ..|..:|...|     :.|:                  :|.
 Worm   379 NIDTEFKLHIDPSFGNCYTFNANPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHG 443

  Fly   237 VEEMMLPDDMRTPSFDAKDIESKDLDIMLHTTSAESEVRNLPVAYRKCRFSDENNLQYYS----- 296
            .||...||   |..:.|.........|.|.      .:..||..|..|...|  |.|..|     
 Worm   444 KEECPFPD---TFGYSAPTGVISSFGISLR------NINRLPQPYGNCLQKD--NPQSRSIYKGY 497

  Fly   297 PYHPSLCRLECRIKWALSLCNCKPYFYVAAPEVP----------ICTVSGMLCLA------RSKW 345
            .|.|..|...|.....::.|.|      |.|..|          ....:.:.||.      .:|.
 Worm   498 KYEPEGCFRSCYQYRIIAKCGC------ADPRYPKPWKRSAWCDSTNTTTLNCLTTEGAKLSTKE 556

  Fly   346 LERPCDCYPSCREETF-TIFKVSDQTGGD-----DNYSGE----RFERTLIINLQISRMG---IN 397
            .::.|.|...|:::.: |.:..:....|.     ||:|.:    ..|...:|.:...:|.   :.
 Worm   557 NQKHCKCIQPCQQDQYTTTYSAAKWPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQMSYEILR 621

  Fly   398 RRVVFSTDQLIMSFGGAIGLFLGASFMTIYGVVYFFLTFIAYTCKNR 444
            ....:|...|:...||..|||||||.|::...::|.:..:...||.|
 Worm   622 ESESYSWFNLMADMGGQAGLFLGASIMSVIEFLFFAVRTLGIACKPR 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk25NP_995766.1 ASC 18..432 CDD:279230 112/616 (18%)
del-1NP_001355359.1 deg-1 75..656 CDD:273309 112/618 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7253
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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