DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12d1-d and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001072550.1 Gene:cyp46a1.2 / 780005 XenbaseID:XB-GENE-5802444 Length:503 Species:Xenopus tropicalis


Alignment Length:496 Identity:127/496 - (25%)
Similarity:225/496 - (45%) Gaps:82/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNT--- 100
            |..||.||.|.:..|              |..:::|:.|...:..:|...|  .|||..:..   
 Frog    33 HMKYDHIPGPPRDSF--------------IFGHSTALLKLVNENLLMYDYF--LDWVHKYGPVMR 81

  Fly   101 -----KDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEV-------QGLVASQN-EAWGKLR 152
                 |...:|...|||   ::.|.|..|.::... |.:|.:       :||:..:: :.|.|.|
 Frog    82 INGLHKVAVLVASPEGI---KEFLMSPKYLKDEFY-DFFGSLFGERLMGKGLLTDRDYDHWHKQR 142

  Fly   153 SAINPIFMQP--RGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAF 215
            ..::|.|.:.  .||   ..|.:....|.:|::.|..|.| .||  :..|..|::..:.:|.|.|
 Frog   143 RIMDPAFSRTYLMGL---MGPFNEKAEELMEKLSENSDRK-CEV--NMHDMFSKVTLDVIGKVGF 201

  Fly   216 DRQMGLIRKNRDNSD---ALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVS 277
            ..::..:  |.|.:.   |::|....        .::|:..|.|      |...||.|...:..|
 Frog   202 GMELNSL--NDDQTPFPRAISLVMKG--------SVEIRNPMIK------YSLAKRGLIRKVQES 250

  Fly   278 QKMLKE-NQDALEKRR---QAGEKINSNSMLERL------MEIDPKVAVIMSLDILFAGVDATAT 332
            .::|:: .::.:|:|:   |.||:|..:.:.:.|      .:.||:..:...:....||.:.||.
 Frog   251 IRLLRQTGKECIERRQKQIQDGEEIPVDILTQILRGTALEKDCDPETLLDNFVTFFIAGQETTAN 315

  Fly   333 LLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRT 397
            .||..::.|.::|:...|.:.|:..::.:|.. :..|::..:.||..|:|||||.||...||.||
 Frog   316 QLSFAVMSLGRNPEILKKAQAEIDEVIGSKRD-IEYEDLGKLSYLSQVLKETLRLYPTAPGTSRT 379

  Fly   398 CQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGF 462
            .:|::::...|:|...|::|.|.|:.:...||..|..|.|:|:  .|:..|..    ||:.||..
 Frog   380 LENEIVIDEVRIPGNVTLMLNSYVMGRMEQYYKDPLMFNPDRF--SPDAPKPY----FTYFPFSL 438

  Fly   463 GPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTM 503
            |||.|||:....:|.:..:||.::.:  ||.....:.||.:
 Frog   439 GPRNCIGQVFSQMEAKVVMAKFLQRY--EFELAEGQSFKIL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 119/465 (26%)
cyp46a1.2NP_001072550.1 p450 40..482 CDD:365848 123/489 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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