DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12d1-d and cyp27a1.3

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_002934001.3 Gene:cyp27a1.3 / 594905 XenbaseID:XB-GENE-18386061 Length:518 Species:Xenopus tropicalis


Alignment Length:495 Identity:131/495 - (26%)
Similarity:236/495 - (47%) Gaps:57/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KTYDEIPRPNKFKFMR-AFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKD- 102
            ||.|::|.|:..|.:. .|:.|..|:.   .|.....:|.||.::.|.   .|:..:.|..:.| 
 Frog    45 KTLDDLPGPSPLKLLYWIFLRGYLFRT---HELQVIFKKTYGPMWKMS---DRQHAMVTVASPDL 103

  Fly   103 IEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRM 167
            :|.:.|.||.:|.|  .|..: .|||  .|:.|...|.|..:...|.::|:.:|...::||...:
 Frog   104 LESLLRKEGKYPTR--ADMFI-MREH--RDLRGHSYGPVTEEGHQWHRIRTILNQRMLKPRETVV 163

  Fly   168 YYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEIS-RLVFESLGLVAFDRQMGLIRKNRDNSDA 231
            |...::.:.::.:.:|||:....:.....:...|:. :..|||:..|.|:.::|.:.|.      
 Frog   164 YAGSMNEVVSDLLLKIKELTAQSSSGTQVNGVAELMYKFAFESICTVLFETRLGCLNKE------ 222

  Fly   232 LTLFQTSRDIFRLTFKLD-----IQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKR 291
             .|.:|.:.|..:...|:     .:...|.....|.:.:.....:...:..:|::.:..:.:|.|
 Frog   223 -ILPETQKFIDSIGIMLEHLTMLTRLPQWTKGILPYWGRYIEAWDTIFDFGKKLIDKKMEDIEGR 286

  Fly   292 RQAGEKINSNSMLERLM-------EIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQA 349
            .:.||::....:...|.       |:...|     :::|.||||.|:..|:..|..||::|:.|.
 Frog   287 LKRGEEVEGEYLTYLLSSGKLSMEEVYGSV-----VELLQAGVDTTSNTLTWALYQLSRNPEIQN 346

  Fly   350 KLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTC-QNDVILSGYRVPKGT 413
            .|.:|::.::| .:::.:.|.:..||.|:||||||||.:|......|.. :.:|.:..|..|..|
 Frog   347 NLYQEVIRVIP-GETIPDSEAIARMPLLKAVIKETLRLFPVVPENARMINEKEVTIKDYVFPVKT 410

  Fly   414 TVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEME 478
            ..:||...:.::.|.:|..|.|||||||||    ..|:..||..:|||:|.|.|:|:|:.:|||.
 Frog   411 QFILGHYAISRDETTFPEADRFLPERWLRD----SGMKHHPFGSIPFGYGVRACVGRRIAELEMH 471

  Fly   479 TTVAKLIRNFHVEFNRD-------------ASRPFKTMFL 505
            ..::::|:.|.|..:.|             |:||....|:
 Frog   472 LALSRIIKMFQVIPDPDLGEVGAKNRAVLVANRPVNLRFI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 122/464 (26%)
cyp27a1.3XP_002934001.3 cytochrome_P450 79..508 CDD:425388 120/453 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

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