DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-d and si:ch211-113j14.1

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_686522.4 Gene:si:ch211-113j14.1 / 558239 ZFINID:ZDB-GENE-120215-110 Length:573 Species:Danio rerio


Alignment Length:507 Identity:132/507 - (26%)
Similarity:251/507 - (49%) Gaps:49/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAKSSITEEHKTYDEIPRPN-----KFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMF 89
            |:.::||..:||.|::|.||     .:.|::.:   .:..:|...|:    ::.||.|:  ...|
Zfish    92 QSANTITGRYKTKDDLPGPNLATTVYWLFVKGY---ADKSHAMQVEH----KRLYGPIW--RSRF 147

  Fly    90 GRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSA 154
            |..|.:.......|..|.|.||.:|.|..|.   ::||:  .|:.|:..|:.......|.::|||
Zfish   148 GPFDVINVAGADLIAQVIRQEGRYPVRTDLP---HWREY--RDMRGQAYGIHVDTGPEWYRIRSA 207

  Fly   155 INPIFMQPRGLRMYYEPLSNINNEFIERIK--EIRDPKTLEVPEDFTDEISRLVFESLGLVAFDR 217
            :||..::.:.:..|...:..:.::.::|::  .:|.|..:.| .|...|:.:..||.:..:.|:.
Zfish   208 LNPKMLKLKEVTAYAPIIHEVVSDLLQRLELLRLRSPDQITV-SDLASELYKFGFEGISSILFET 271

  Fly   218 QMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLK 282
            ::|.:::... :|.|.......::..|:..:...| .|.....|.:::..:..::..:|::.::.
Zfish   272 RLGCLQEEIP-TDTLRFISAVNEMLALSETVLFFP-RWTRHIFPFWKRFVQAWDELYDVARHLID 334

  Fly   283 ENQDALEKRRQAGEKI---------NSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVL 338
            :..:.:..:...||::         :||.:  .|.|:     .|...::|..|||.|:..||..|
Zfish   335 KKVNEIRDQVARGEEVEGMYLTYLLSSNKL--SLGEV-----YISLTELLLGGVDTTSNTLSWTL 392

  Fly   339 LCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMR-TCQNDV 402
            ..|:::|:.|.:|..|::|:.|.| .:.|.:::..|||::|||||.||.||...|..| |..:|:
Zfish   393 YHLARNPEIQKRLHNEIVSVCPNK-KVPNTDDLTKMPYMKAVIKEILRMYPVVPGNGRLTVDSDI 456

  Fly   403 ILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMC 467
            ::..|..||.|...|....:..:...:|..:.|:||||:||  :..:.|..|::.:|||.|.|.|
Zfish   457 VVDNYWFPKKTQFHLCHYAVSHDENNFPDAERFVPERWIRD--SPSRSQHHPYSSVPFGVGVRAC 519

  Fly   468 IGKRVVDLEMETTVAKLIRNFHVEFNRDASRPF---KTMFLMEPAITFPFKF 516
            :||||.:|||...:::|::.:  |....|..|.   ||..|:.|:.....:|
Zfish   520 VGKRVAELEMYFALSRLMQQY--EVRTKAGSPSIQPKTRTLLIPSQPIDLQF 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 119/452 (26%)
si:ch211-113j14.1XP_686522.4 p450 108..569 CDD:278495 125/489 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.