DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-d and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_009292815.1 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:528 Identity:124/528 - (23%)
Similarity:217/528 - (41%) Gaps:124/528 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAM--------------RKRYGDIYVMPGMF 89
            |:.||.||.|.:..|:....|          ..|.||              .::||.:|      
Zfish    32 HQKYDHIPGPPRDNFLLGHSP----------SLTKAMYSDDSLIHDLFLQWAEKYGPVY------ 80

  Fly    90 GRKDWVTTFN-----------TKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGE---VQGL 140
                .:.|.:           ||.|.|        ..:...|...|.|..   :::|:   ..||
Zfish    81 ----RINTLHYIAILVHCPEATKTILM--------SPKYAKDPFSYSRLF---NLFGKRFLGNGL 130

  Fly   141 V-ASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISR 204
            | |..::.|.:.|..::|.|.... ||........::...:::::|:.:.||   |....|.::.
Zfish   131 VTAVDHDIWYRQRRIMDPAFSSSY-LRSLISTFDEMSERLMDKLEEMANNKT---PAVMHDLVNC 191

  Fly   205 LVFESLGLVAFDRQMG-LIRKNRDNSDALTLFQT-----SRD-IFRLTFKLDIQPSMWKII---- 258
            :..:.:..|||...:. |.:|:....:|:.|...     :|| :||      |.|..||:|    
Zfish   192 VTLDVICKVAFGVDLNFLTQKDSPFQNAIELCLNGMALDARDPLFR------IFPKNWKLIQQIR 250

  Fly   259 -STPTYRK--------MKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKV 314
             :....||        .|..:.:..:|.:.:|.:.....|:     |.:||:..||::|:     
Zfish   251 DAAVLLRKTGEKWIQNRKTAVKNGEDVPKDILTQILKIAEE-----ENVNSSEDLEQMMD----- 305

  Fly   315 AVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRA 379
               ..:....||.:.||..||..::.|.::|:...:.:.|:..::.||..:.||: :..:.||..
Zfish   306 ---NFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKREISNED-LGKLTYLSQ 366

  Fly   380 VIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDP 444
            |:|||||.||...||.|....|:|::|.::|.|.:|:..|.|..:...::..|.:|.|||:  |.
Zfish   367 VLKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERF--DE 429

  Fly   445 ETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPA 509
            ...|..    :.:.||..|||.|:|:....:|.:..:|||::.|.              |.:.|.
Zfish   430 NAPKPY----YCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFE--------------FSLVPG 476

  Fly   510 ITFPFKFT 517
            .:|..|.|
Zfish   477 QSFDIKDT 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 112/486 (23%)
cyp46a1.2XP_009292815.1 p450 39..495 CDD:278495 120/521 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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