DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12d1-d and Cyp46a1

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_006240610.1 Gene:Cyp46a1 / 362782 RGDID:1306605 Length:500 Species:Rattus norvegicus


Alignment Length:494 Identity:121/494 - (24%)
Similarity:222/494 - (44%) Gaps:66/494 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMP---------GGEFQNASITEYTSAMRK 77
            ||.:||.....:.:......|:.||.|.:..|:...:|         |...|:..:.     ..|
  Rat    10 SAVLLAFGLCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWKKDEACGRVLQDVFLD-----WAK 69

  Fly    78 RYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGE---VQG 139
            :||.: |...:|.:...:.|    ..|.|  .:.:...:...||.:|   .....|:||   .||
  Rat    70 KYGPV-VRVNVFHKTSVIVT----SPESV--KKFLMSTKYNKDSKMY---RAIQTVFGERLFGQG 124

  Fly   140 LVASQNEA-WGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKT-LEVPEDFTDEI 202
            ||:..:.. |.|.|..::..|.     |.....|....||..|::.||.:.|. .:.|....|.:
  Rat   125 LVSECDYGRWYKQRRVMDLAFS-----RSSLVSLMGTFNEKAEQLMEILEAKADGQTPVSMQDML 184

  Fly   203 SRLVFESLGLVAFDRQMG-LIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKM 266
            :....:.|...||..:.. |:...:..|.|:.:........|.|        :.|.:  |..||.
  Rat   185 TCATIDILAKAAFGMETSMLLGAQKPLSQAVKVMLEGISASRNT--------LAKFM--PGKRKQ 239

  Fly   267 KRTLNDSLNVSQKMLKENQDALEKRRQA---GEKINSNSMLERLMEI-----DPKVAVIMSLDIL 323
            .|.:.:|:.:.:::   .:|.:::||:|   ||.:.:: :|.::::.     |.:|.:...:...
  Rat   240 LREIRESIRLLRQV---GKDWVQRRREALKRGEDVPAD-ILTQILKAEEGAQDDEVLLDNFVTFF 300

  Fly   324 FAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYY 388
            .||.:.:|..|:..::.||:.|:..|:|:.|:..::.:|.. |:.|::..:.||..|:||:||.|
  Rat   301 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH-LDYEDLGRLQYLSQVLKESLRLY 364

  Fly   389 PNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVS 453
            |..:||.|..:.:.::.|.|||..|.:|..:.|:.:..||:..|..|.|:|:      |......
  Rat   365 PPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF------GPGAPKP 423

  Fly   454 PFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEF 492
            .||:.||..|.|.|||::...:|::..:|||::  .:||
  Rat   424 RFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQ--RLEF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 109/437 (25%)
Cyp46a1XP_006240610.1 p450 34..466 CDD:278495 115/470 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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