DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-d and Cyp11a1

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_058982.1 Gene:Cyp11a1 / 29680 RGDID:69325 Length:526 Species:Rattus norvegicus


Alignment Length:562 Identity:135/562 - (24%)
Similarity:239/562 - (42%) Gaps:115/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RSVAI-----YVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRP------NKFKFMRAFMPGG 61
            |||.:     ::.||  .:...:.....|..|.|...::::|||.|      |.:.|:|      
  Rat     9 RSVLVKSCQPFLSPV--WQGPGLATGNGAGISSTNSPRSFNEIPSPGDNGWINLYHFLR------ 65

  Fly    62 EFQNASITEYTSAMR--KRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDS-IV 123
              :|.:...:...|:  ::||.||  ....|..:.|...:.||...:|..||..|.|..:.. :.
  Rat    66 --ENGTHRIHYHHMQNFQKYGPIY--REKLGNMESVYILDPKDAATLFSCEGPNPERYLVPPWVA 126

  Fly   124 YFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERI-KEIR 187
            |.:.:.||      .|::...::||.|.|..:|...|.|..::.:...|..:..:||:.: :.|:
  Rat   127 YHQYYQRP------IGVLFKSSDAWRKDRIVLNQEVMAPDSIKNFVPLLEGVAQDFIKVLHRRIK 185

  Fly   188 DPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNS-----DAL-TLFQTSRDIFRLTF 246
            ...:.:...|.:|::.|..|||:..|.|..::|::.:..|..     ||: .:|.||..:     
  Rat   186 QQNSGKFSGDISDDLFRFAFESITSVVFGERLGMLEEIVDPESQRFIDAVYQMFHTSVPM----- 245

  Fly   247 KLDIQPSMWKIISTPTYR------------------------KMKRTLNDSLNVSQKMLKENQDA 287
             |::.|.::::..|.|::                        :.||..:....|...:|      
  Rat   246 -LNMPPDLFRLFRTKTWKDHAAAWDVIFSKADEYTQNFYWDLRQKRDFSKYPGVLYSLL------ 303

  Fly   288 LEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLR 352
                  .|.|:...::...:.|            :|..|||.|:..|...|..::.:...|..||
  Rat   304 ------GGNKLPFKNIQANITE------------MLAGGVDTTSMTLQWNLYEMAHNLKVQEMLR 350

  Fly   353 EELLSIMPTKDSLLNEENMKDM-------PYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVP 410
            .|:|:        ...:...||       |.|:|.||||||.:|......|...||::|..|::|
  Rat   351 AEVLA--------ARRQAQGDMAKMVQLVPLLKASIKETLRLHPISVTLQRYIVNDLVLRNYKIP 407

  Fly   411 KGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDL 475
            ..|.|.:.|..:.:|::::|.|::|.|.|||.     |....:.|.:|.||:|.|.|:|:|:.:|
  Rat   408 AKTLVQVASYAMGRESSFFPNPNKFDPTRWLE-----KSQNTTHFRYLGFGWGVRQCLGRRIAEL 467

  Fly   476 EMETTVAKLIRNFHVEFN--RDASRPFKTMFLMEPAITFPFK 515
            ||...:..::.||.:|..  ||....|..:.:.|..|.|.|:
  Rat   468 EMTIFLINVLENFRIEVQSIRDVGTKFNLILMPEKPIFFNFQ 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 115/480 (24%)
Cyp11a1NP_058982.1 cytochrome_P450 80..505 CDD:425388 115/475 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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